KEGG   Shewanella violacea: SVI_3282
Entry
SVI_3282          CDS       T01206                                 
Symbol
prfC
Name
(GenBank) peptide chain release factor 3
  KO
K02837  peptide chain release factor 3
Organism
svo  Shewanella violacea
Brite
KEGG Orthology (KO) [BR:svo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:svo03012]
    SVI_3282 (prfC)
Translation factors [BR:svo03012]
 Prokaryotic type
  Release factors
   SVI_3282 (prfC)
SSDB
Motif
Pfam: GTP_EFTU RF3_C GTP_EFTU_D2 EFG_III MMR_HSR1 SRPRB
Other DBs
NCBI-ProteinID: BAJ03253
UniProt: D4ZB58
Position
complement(3720442..3722022)
AA seq 526 aa
MSGNTVEVGKRRTFAIISHPDAGKTTITEKVLLFGNALQKAGTVKGKKSGQHAKSDWMEM
EKERGISITTSVMQFPYKEALINLLDTPGHEDFSEDTYRTLTAVDSCLMVIDSAKGVEQR
TIKLMEVTRLRDTPIVTFMNKLDRDIRDPLELMDEVEDVLNIACAPITWPIGSGKEFKGV
YHLLRDEVILYQSGQGHTIQDSRVIKGLDNPELDEAIGAYADEVREELELVLGAATEFDL
EMFLKGELTPVFFGTALGNFGVDHILDGMVEWAPTPQPRETEMRPVLPQEEKFSGFVFKI
QANMDPRHRDRVAFMRICSGKYEQGMKMHHVRLGKDVNVSDALTFMAGDRNRAVVAYPGD
IIGLHNHGTMRIGDTFTQGEKLRFTGIPNFAPEMFRRIRLRDPLKQKQLLKGLVQLAEEG
AVQVFRPIDSNDLIVGAVGVLQFEVVVGRLKSEYKVEAIYEAIHVATARWVYCDDEKKLD
EFRRKCSLNLALDGGNNLTYIAPTMINLNLSMERYPDIHFAKTREN
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgtcaggcaatacagttgaggtcggcaaacgtcgtactttcgccattatctctcacccg
gatgcgggtaaaaccaccattaccgaaaaagtactcttgttcggtaatgccttacagaaa
gccggaaccgtaaaaggcaagaagtcaggccaacatgccaagtctgattggatggagatg
gagaaagagcgtgggatctcgatcaccacgtctgtaatgcagtttccctataaagaagct
ttgatcaatcttctcgatacaccgggtcacgaagacttctccgaagatacctatcgtact
ctaacagccgtcgattcctgcttaatggttatcgactcggcaaaaggtgtagagcaaaga
acgattaagctaatggaagtcacgcgcctgcgtgatacgcctatcgtgaccttcatgaac
aagcttgatcgtgatatacgcgatccattagagctgatggatgaggtcgaagatgtactg
aatattgcctgtgctcctattacttggcctattggttcaggtaaagagtttaaaggcgtt
taccatctattacgtgatgaagtgattctataccagagtggtcaaggtcataccatccaa
gattctagggtcatcaagggactggataatccagagcttgatgaagctatcggcgcctat
gccgatgaagtgcgcgaagagttagaattggttcttggcgcagccaccgagtttgatctc
gagatgttcctcaagggagagctgacaccggtattctttggtaccgctctgggtaacttt
ggtgtcgatcatatcctcgatggtatggtcgaatgggctcctacacctcagcctcgtgaa
accgagatgagacctgtattgccccaagaggagaagttcagcggcttcgtgtttaagatc
caagcaaacatggacccaagacacagagacagagtcgcatttatgcggatctgttcgggt
aagtatgagcagggcatgaagatgcaccatgttcgtctaggcaaagatgtaaacgtcagt
gatgccctgacctttatggctggcgatcgtaatcgcgcggtagtggcctatccaggcgat
attatcggcctgcataaccacggcaccatgcgtatcggcgatacatttacccaaggtgag
aagctgcgtttcacaggtatacctaactttgctcctgagatgttccgtcgtattcgttta
agagatccattgaaacagaagcaactacttaagggcttagtccagcttgctgaagagggc
gccgtacaggtctttagacccatagattctaacgatcttattgttggtgctgtcggtgta
cttcagtttgaagtggtcgttggtcgattgaagagtgaatataaggtcgaagccatctat
gaagccatccatgtagccacagctcgctgggtatactgtgatgatgagaagaagctcgat
gagttcagacgtaagtgcagccttaacttagcgctggatggtggcaataacctgacctat
atcgccccgactatgattaaccttaatctgtctatggagcgttatccggatattcatttt
gccaagactcgtgagaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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