KEGG   Shewanella woodyi: Swoo_0042
Entry
Swoo_0042         CDS       T00676                                 
Name
(GenBank) Microbial collagenase
  KO
K01387  microbial collagenase [EC:3.4.24.3]
Organism
swd  Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:swd00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:swd01002]
    Swoo_0042
  09183 Protein families: signaling and cellular processes
   02042 Bacterial toxins [BR:swd02042]
    Swoo_0042
Enzymes [BR:swd01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.3  microbial collagenase
     Swoo_0042
Peptidases and inhibitors [BR:swd01002]
 Metallo peptidases
  Family M9
   Swoo_0042
Bacterial toxins [BR:swd02042]
 Toxins that damage the extracellular matrix
  Hyaluronidases/Collagenases
   Swoo_0042
SSDB
Motif
Pfam: Peptidase_M9
Other DBs
NCBI-ProteinID: ACA84343
UniProt: B1KCW8
Position
complement(46211..47974)
AA seq 587 aa
MFRQSVIALALLSLSGCSSTAKISLDNTQINKIMEAQEQSLFKADSPLLTKDIFIQVSLA
LASVNDEQQADKLLYYLRAFSYFGPKELLDSSSIEALTLGLSELTNKPFFSRSPRLQEHF
AVTIYRYYSDNDNAQQLAKLLPMLEAQLISLGESNTNLANDYGLWETLRAYGMLFNSARK
DVDGELNQQIVALDLAKPLLDFASSNTSIREGNDWPKANAYWALGLYRLALPTSDENKPT
LAEDRIDKAVAEIAKVDISIRGDDAKDTYTLGFHVNAFAGKDRCEQNSDICRIPELTDIL
PIHHPCSDSLFILAQDLNQEELASSCTKLTSQEANFHQILETGHQATPNDFNTALRVVAF
KNWSQYNAYGQLLFDINTDNGGMYIEGTPSKPGNQATFFAYRQFWIQPEFAIWNLNHEYV
HYLDGHFVKYGGFGHFPSKMVWWSEGLAEYIAKGDSNPNTLKVIKRDIEKAPTLEEIFAT
EYDDGQDRTYKWSYMAVRFLAEHHHSDFVQLSQFLKTDYFEGYEQLLQSLTQYQPEFSNW
LNTQVNQFDDNQDKNKVKVKINKLNRYSYREYLKPTHLVQDKKHLHY
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgtttcgccaatcagttattgctcttgcgcttctttcactctctggctgcagctcaact
gcaaagataagtttagataacacacagataaacaagatcatggaagctcaagagcaatct
ctatttaaagcagatagtccactgttaactaaagatatatttatacaggtaagtttagca
ttagcgagtgttaacgatgagcaacaagcagataagctcctctattacctccgtgctttt
agttattttggccctaaagaactactcgacagttccagcattgaagccctcactcttggc
ctatctgaactcacaaataaaccatttttttctcgttcccctcgcctacaggagcatttt
gctgtgacgatttatcgctactacagtgataatgacaacgcgcagcaactcgcaaagctt
ctacccatgcttgaggctcaacttatttcactgggtgaaagcaatactaacttagctaac
gactacggactttgggaaacactcagggcctacggcatgttatttaacagtgcaagaaag
gatgtagacggagagttgaatcaacaaattgtcgctttagatctggccaagccattatta
gactttgcctcttcaaataccagcatcagagagggtaacgactggccaaaggcaaacgca
tactgggcacttggcctctatcgcctagccctaccaactagcgacgagaataaacccaca
ttagctgaagatagaatagataaagcagttgctgagatcgccaaagtagatatctcaata
agaggggatgatgccaaagacacatacaccttagggtttcatgtaaatgcctttgcagga
aaagatcgttgtgaacagaacagtgatatctgccgcatcccagaactaaccgacatttta
cccatacatcacccctgctccgacagcttgtttatcttggcccaagatctgaatcaagag
gagctggcaagcagctgcaccaaattgacctcacaagaagcaaacttccaccagatactc
gagacagggcatcaagcaacgccaaatgattttaatacagcgcttagagtcgttgccttt
aaaaactggagccaatataacgcttatggtcagctactatttgatatcaataccgacaat
ggtggtatgtatatcgaaggcactccctctaagcctggaaaccaagccaccttctttgcc
tatcgccaattttggatccaaccagagtttgcaatttggaacttaaatcatgaatacgtt
cattacctagatggtcactttgtaaaatatggaggcttcggtcatttcccatctaaaatg
gtctggtggtctgaagggttagcggaatatatcgctaaaggtgattccaacccaaacaca
ctaaaagtcatcaaacgtgatatagaaaaagcgccgactcttgaggagatttttgccaca
gaatatgatgatggccaagacaggacctataagtggagctatatggcggttcgctttctc
gctgagcaccaccacagtgattttgttcagctaagtcaattcctgaaaaccgactacttt
gagggctatgaacaactgctgcagtcactcactcaatatcagccagagttctctaactgg
cttaacactcaagttaaccaatttgatgataaccaagataagaataaggttaaggttaag
atcaataaactaaaccgttacagctatcgggaatacttaaaaccaactcacttagtacag
gataagaaacacctgcactattaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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