KEGG   Shewanella woodyi: Swoo_1138
Entry
Swoo_1138         CDS       T00676                                 
Name
(GenBank) thiamine pyrophosphate protein domain protein TPP-binding
  KO
K00175  2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
Organism
swd  Shewanella woodyi
Pathway
swd00010  Glycolysis / Gluconeogenesis
swd00020  Citrate cycle (TCA cycle)
swd00620  Pyruvate metabolism
swd00650  Butanoate metabolism
swd00720  Other carbon fixation pathways
swd01100  Metabolic pathways
swd01110  Biosynthesis of secondary metabolites
swd01120  Microbial metabolism in diverse environments
swd01200  Carbon metabolism
swd01210  2-Oxocarboxylic acid metabolism
Module
swd_M00009  Citrate cycle (TCA cycle, Krebs cycle)
swd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:swd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Swoo_1138
   00020 Citrate cycle (TCA cycle)
    Swoo_1138
   00620 Pyruvate metabolism
    Swoo_1138
   00650 Butanoate metabolism
    Swoo_1138
  09102 Energy metabolism
   00720 Other carbon fixation pathways
    Swoo_1138
Enzymes [BR:swd01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.7  With an iron-sulfur protein as acceptor
    1.2.7.3  2-oxoglutarate synthase
     Swoo_1138
    1.2.7.11  2-oxoacid oxidoreductase (ferredoxin)
     Swoo_1138
SSDB
Motif
Pfam: TPP_enzyme_C PFO_beta_C
Other DBs
NCBI-ProteinID: ACA85431
UniProt: B1KHC3
Position
1463184..1464236
AA seq 350 aa
MSYIKPQFKHPRLQVNDLGLTHRDYEGALSTLCAGCGHDSITSAVAQACAELSLPPHKIA
KLSGIGCSSKAPTYFLNNAHGFNTVHGRMPSVATGANMANRELIYLGMSGDGDSASIGFG
QFAHVVRRRLNMLYMVANNGVYGLTKGQLAATAEQGMKSKSGEASLFTDIDLCVSALQFG
ATFVARSFSGDKSQLVPLIKAAISHKGFAFIDIISPCVTFNNNPDSNRSYDYVHDHITTA
AVADFVPVKQEIRCENGQSDSEDICLHDGSILRLSRIDADYDAHDRIKAMTKIEQLKSEG
KILTGLMYIDPEADDYHEINGTSDAPLNSLKQETLCPGSHVLKTINESFR
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgagttacatcaaaccacaatttaagcacccaagactgcaggtcaatgatcttggctta
acccacagagattatgaaggcgcactgtccaccttatgtgcaggctgtgggcatgactct
atcacctctgcggttgcgcaggcttgtgctgaactctctctgccaccacataagatagct
aagttatcaggcataggttgctcctcgaaagcgcccacctattttcttaacaacgcccat
ggttttaatactgtacatggacgtatgccttcggttgcaacgggggcgaatatggccaat
cgggagcttatctatcttggaatgtccggtgatggcgatagtgcctccattggatttggc
cagtttgcccatgtggtcaggcgccgtttaaacatgctctatatggtggccaataacggc
gtatatggtttaactaagggccagttggcagccactgctgagcagggaatgaagagtaaa
tccggtgaggcgagtctgtttactgatattgacctgtgtgtgagtgcactgcagtttggc
gcgacctttgtggcgcgcagtttttccggtgataagtcgcaattggtgcccttaattaag
gcggcgattagccataaggggtttgcgtttattgatatcatctccccctgcgtgaccttt
aataataaccccgattcaaatcgctcctatgattatgtccatgatcatattaccactgct
gcggtggcagattttgtgcctgttaagcaggagatacgctgcgagaatggccaatcagat
agcgaggatatctgccttcatgatggatccattttgcgtctgtcgagaatagatgccgat
tatgatgcccatgatcgtatcaaggcgatgacaaaaatagagcagttaaagtcggagggg
aaaatactcacaggcctgatgtatatcgatccagaagccgatgattatcatgagataaac
ggcacatctgatgccccactaaactctttaaagcaggaaactctctgccccggcagccat
gtattgaaaaccatcaatgagagctttaggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (14)   
   KEGG PATHWAY (10)   
   KEGG MODULE (4)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system