KEGG   Shewanella woodyi: Swoo_1793
Entry
Swoo_1793         CDS       T00676                                 
Name
(GenBank) DNA polymerase III, subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
swd  Shewanella woodyi
Pathway
swd03030  DNA replication
swd03430  Mismatch repair
swd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:swd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Swoo_1793
   03430 Mismatch repair
    Swoo_1793
   03440 Homologous recombination
    Swoo_1793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:swd03032]
    Swoo_1793
   03400 DNA repair and recombination proteins [BR:swd03400]
    Swoo_1793
Enzymes [BR:swd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Swoo_1793
DNA replication proteins [BR:swd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Swoo_1793
DNA repair and recombination proteins [BR:swd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Swoo_1793
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA AAA_22 RuvB_N AAA_16 AAA_5 DNA_pol3_delta ResIII AAA_14 PIF1 AAA_2 TsaE AAA_30 AAA_assoc_2 AAA_18 AAA_7 AAA_19 nSTAND3
Other DBs
NCBI-ProteinID: ACA86077
UniProt: B1KNK0
Position
2213404..2216139
AA seq 911 aa
MSYQVLARKWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAK
GLNCEQGVTATPCGQCSSCVEISEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQ
DEIIQQLSHVLTQESLVFENQALTLLAKAANGSMRDALSLTDQAIAFGGGEVRLKQVQTM
LGSIDERHVITLFNAITQGDIEHLMQVISQVLSFGADPEEVLRSLLELLHQITLSQFAPA
AAQLSIYSEQISAFAIQLSPEQVQLYYQLLLTGRKDLPHAPDPKSGLEMALLRAVSFVPE
VPVKRWIVDKPATISVPDVNDAKPSAHAVEATQISTPLTTNAAIPPAESLDGIGDIESPE
LKLQKESEPATEFGSTSDSADHSAKENVPVLASASDEPEESDDQDADLESLNSEQTLILS
QAASQGMEQESTDSTELQASVDVKEAEVVPESTQSQSEVIPERTESAVEISSESSDSDPN
VVPDEYYAQAAQFDAQNEYQEQFHEDYSDPYSEDTAEQGAYSTPEPSAESHESRSAEISA
ADGPEEDDILDAVLAARDSLLTQLSADKPKESDGKKSDPQRKEFVPPKRQAPVAEPQEPI
QSEDNQTAHQAEHQADKSDGDETGENEVDVNVADNEDRPPWEEPLTPSVEETLSDATPNV
EDLESESTQASELEESVSEPEDKMLAAEISLADDGSVSGNEVDLKWYRLMSALDVGGRVR
QLAVNSVCHHFIEPLALLLKPNQKHLAADIAITQLEEALGRALDKEVNIAVSVGSDTTRE
TPLEIRQRFHRELLSQAHQGLMSDTHIQWLMAEMDAEFETDSLSYSPELLSLKGNTIELI
DKSNFKSLPES
NT seq 2736 nt   +upstreamnt  +downstreamnt
atgtcttatcaggtgttggccagaaaatggcgccctgccacttttgagcaaatggttggc
cagtctcatgttttgcatgcgttaaccaacgcactaactcagcagagattacatcatgca
tatctgttttctggtacacgaggggtggggaaaacaagtttagcccgactcttcgcaaaa
ggattaaattgtgaacaaggtgtcacggcaaccccgtgtggacaatgttccagttgtgtt
gagatctctgaaggtcgcttcgtggatcttattgaggtggatgcggcttcaagaacaaaa
gtcgatgacacgcgtgagttacttgataatgtccagtaccgtcccagtcgaggccggttt
aaagtctatttgatcgatgaagtgcatatgctgtcccgcagtagctttaatgcgctcctt
aaaacattggaagagccacctgagcatgtaaagtttttgctagcaacaacggatccccag
cgtcttcctgtgacagttctttcgcgttgtttacagtttaatttaaaaagtttgacccaa
gatgagatcattcaacagttatcccatgtgttgactcaagagtcgcttgtctttgaaaat
caagcattaacattattagccaaagcggctaatggcagcatgcgagatgcattgagcttg
actgaccaagcgatcgcttttggtggcggggaagttagacttaagcaagtgcagactatg
ctaggtagcattgatgaaaggcatgttatcacgctttttaacgccataactcagggagat
attgagcaccttatgcaggtgatctcccaagtgctctcatttggtgctgatcctgaagag
gtgctgcgtagcttacttgaactgttacatcagataaccttaagtcaatttgcccccgct
gcggctcagctatccatctatagtgagcagattagcgcatttgcaatacagttaagccca
gaacaggtgcaactctattaccagttactgttaacaggccggaaagatcttccccatgca
cctgatcctaaatcgggtctggagatggcactactcagagcggtgtcatttgtgccagag
gtacctgttaagcgttggattgtcgataagcctgccactatttcagtgcctgatgttaat
gatgctaagccaagcgctcatgctgttgaggctactcaaatttccacgcctttaactaca
aatgcagcgataccacctgcagagtctcttgatggaataggtgatattgagtctcctgag
ctcaagctacaaaaggagagcgagcctgcaactgagtttggtagtacatctgatagtgca
gatcatagtgctaaggaaaacgtacccgttttagcttccgcctccgatgaacctgaagag
tcagatgatcaagatgctgatcttgagagcttaaacagtgaacaaaccttgatattaagt
caggcagcaagtcagggaatggagcaagagagtacagactccactgagttacaagcatct
gttgatgtaaaagaagctgaagttgtccccgagtcaactcaatcgcagtctgaggttatc
cctgagcgaacagagagtgctgttgaaataagcagtgagtcatctgactcagatcctaat
gtggttcccgatgagtactatgctcaagcggctcagttcgatgctcaaaatgagtatcaa
gagcagtttcatgaggattattcagacccctattcagaagacactgccgagcaaggtgca
tactcaacgccagagccaagtgctgagagtcatgaatcccgttcagctgagatttcagct
gctgatggtccagaggaagatgatattctggatgctgttttagcggcgagagatagtttg
ttgactcaacttagtgctgataagcctaaggagagtgatggaaaaaagtctgatccccag
cgaaaagagtttgttccgcctaagcgacaagcaccggtagcagagcctcaagagccaatt
caaagcgaagataatcaaactgctcatcaagcagagcaccaagctgataaaagtgatggt
gatgaaactggtgagaatgaagttgatgttaacgtcgctgataacgaggataggccacct
tgggaggagccattaactccttctgttgaagagacgttaagcgatgcaacgcctaacgta
gaagacctagagagtgaatcaactcaagcttctgagcttgaggaatctgtttctgagcca
gaagataagatgctggcagctgagattagcttagctgatgatggcagtgtgagcggcaat
gaggtcgatcttaaatggtatcgtttgatgtcggcactggatgtggggggacgagtacgc
caactggcggttaactctgtttgccaccatttcattgaacctcttgcgctcttattaaaa
cctaatcagaagcatcttgctgctgatattgcgataacccaattagaggaagcgctggga
agagccttagataaagaggttaatattgcggtttctgtgggaagtgacaccacccgtgaa
acgcccttagagatacgtcagcgtttccatagagagttactgtctcaggcgcaccaagga
ttaatgagtgatactcatattcaatggttgatggctgagatggatgctgagtttgaaacg
gatagcttaagctacagtccagaattgctcagtttgaaaggaaataccatcgagcttatc
gataagtcgaactttaagtcgctacctgagtcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (33)   

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