KEGG   Shewanella woodyi: Swoo_2705
Entry
Swoo_2705         CDS       T00676                                 
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
swd  Shewanella woodyi
Pathway
swd04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:swd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    Swoo_2705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:swd03016]
    Swoo_2705
Enzymes [BR:swd01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     Swoo_2705
Transfer RNA biogenesis [BR:swd03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    Swoo_2705
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_C tRNA_Me_trans_M NAD_synthase ThiI QueC Asn_synthase SAWADEE ATP_bind_3 PAPS_reduct
Other DBs
NCBI-ProteinID: ACA86981
UniProt: B1KID0
Position
3309839..3310972
AA seq 377 aa
MAIIEPTAALIEPTANKKVIVGMSGGVDSSVSAYLLLKQGYQVEGLFMKNWEEDDTDEYC
AAADDLKDAQAVCDKLGIKLHTVNFASEYWDNVFEYFLAEYKAGRTPNPDIICNKEIKFK
AFLEFADDILDADYIAMGHYVRRSDDSGQSQMLRGIDGNKDQSYFLYTLSHEQVSRSLFP
VGELEKSEVREIAKEMGLITHDKKDSTGICFIGERKFTDFLSTFLPAQPGNIETAEGEVI
GTHQGLMYHTLGQRKGLGIGGMKNSNDDPWYVVDKEMDRNVLVVGQGGNHPRLMSTGFYA
DQLHWVDRIGPDNGAKITVKTRYRQRDVACSLHYDGEDRVKVLFDEPVAAVTPGQSAVFY
DAEVCLGGGIIDSLIRE
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggcgataatcgaaccaactgcggcattaatcgaacccactgctaataaaaaagtcatt
gtcggcatgtccggcggtgttgactcatcagtttcggcttacttgttacttaaacagggc
tatcaagtcgaaggtcttttcatgaaaaactgggaagaagatgacaccgatgaatattgt
gctgctgcagatgaccttaaagacgcgcaagcggtatgcgataagctgggcataaaactg
cacacagtaaactttgcctctgaatattgggacaatgttttcgaatactttctagcagag
tacaaggcaggcagaacgccaaatccagatattatctgtaataaagagataaaatttaag
gcatttcttgagtttgcagatgatattttagacgctgactacatcgccatggggcactat
gttcgccgtagtgatgacagcggtcaaagccagatgctacgaggtatcgacggcaataaa
gatcaaagctattttctctatacactgagccatgagcaagtttcccgctcactatttcct
gtcggtgagcttgaaaaaagtgaagtcagggagattgccaaagagatgggacttatcacc
catgataaaaaagatagtactgggatctgttttatcggtgagcgtaagttcactgacttc
ctcagcaccttcctgcctgcacagcctggtaatattgagactgctgaaggtgaagtcatt
ggaacccatcaaggcttgatgtatcacacccttggacagcgtaaaggtctagggatcggt
ggaatgaaaaacagtaacgatgatccttggtatgtggttgataaagagatggaccgcaat
gtattagttgtgggtcaaggtggtaaccaccctcgccttatgtcgacgggtttttatgct
gaccaacttcactgggttgaccgtattggtcctgacaatggcgcaaaaattacagttaag
actcgttaccgtcaaagagacgtagcctgcagcttacattacgatggcgaagacagggta
aaagtactctttgatgaacctgttgcagcagtgacaccaggccaatcagccgttttttat
gatgccgaagtatgcttaggcggcggtatcatcgattcactaatcagagaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (10)   
   Pfam (10)   
All databases (29)   

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