KEGG   Shewanella woodyi: Swoo_3116
Entry
Swoo_3116         CDS       T00676                                 
Name
(GenBank) cysteinyl-tRNA synthetase
  KO
K01883  cysteinyl-tRNA synthetase [EC:6.1.1.16]
Organism
swd  Shewanella woodyi
Pathway
swd00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:swd00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Swoo_3116
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:swd01007]
    Swoo_3116
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:swd03016]
    Swoo_3116
Enzymes [BR:swd01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.16  cysteine---tRNA ligase
     Swoo_3116
Amino acid related enzymes [BR:swd01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   Swoo_3116
Transfer RNA biogenesis [BR:swd03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Swoo_3116
 Prokaryotic type
    Swoo_3116
SSDB
Motif
Pfam: tRNA-synt_1e DALR_2 tRNA-synt_1g tRNA-synt_1 tRNA-synt_1f
Other DBs
NCBI-ProteinID: ACA87387
UniProt: B1KLU0
Position
complement(3818053..3819432)
AA seq 459 aa
MLKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVAFDMIVRYLRYSGYD
VNFLRNITDVDDKIIKRAAENKESCDSLTERLIGEMHKDFDSLNMKRPDFEPRATLHMAE
IIEMVEKLIEKEHAYVSSNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDSKRDPMD
FVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIA
QSCCAHNTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDAATIRYFLLSGHYRS
QLNYSEDNLKQAKSALARLYTALKDLDLTVEPAAAENFVSKFKQAMDDDFNTPEAYSVLF
DMVREVNRLKVTDLAQASALAVRLKELAGVLGILEQDVDSFFKGESNDAEVAEVEALIAE
RNRARAEKDWPAADIARDGLNALGVILEDGPEGTTWRKK
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgttgaagctatacaacagcctgacccgccaaaaagaggaatttaaaccattacagcca
ggtaaagttggcatgtatgtgtgtgggatcaccatctatgatttatgtcatattggtcac
gggcgtacctttgtagctttcgacatgatagtaaggtacctacgctattctggttacgat
gtgaattttctgcgtaacattactgatgttgatgacaagatcatcaagcgtgcggcagaa
aacaaggagagctgtgattcactgacagagcgtttgatcggtgaaatgcataaagatttc
gactcgttaaacatgaagcgtcccgattttgagcctagagcaacgttgcacatggctgag
attatcgagatggttgaaaagcttattgagaaagagcacgcctatgtgtcatccaatggt
gatgtgttgtttagtgtctcttcattccctgagtatggtcgtttgtctggacaaaattta
gagcaactacaggccggagctcgtgtcgaagtcgaagactccaagcgcgatcctatggat
ttcgtactgtggaagatgtcaaaaccaggtgagccgacttgggagtctccatggggacct
ggtcgtccaggttggcatatcgagtgttcagccatgaacagcaagcatcttggccaacat
tttgatattcatggtggtggtagcgatcttcagttccctcatcatgaaaatgagatcgca
caatcttgctgcgcccataatacgccttatgtgaactactggatgcacacaggcatggtg
atggtcgataaagagaagatgtctaagtctcttaataacttcttcactatccgagatgta
ttagctcattatgatgcggcgacaattcgttacttcttgttgtctggtcactaccgtagc
caacttaactactcagaagataaccttaagcaagctaaatctgcattagcacgtctgtac
acggcactaaaagatctggatttaactgttgagcctgcggcggctgaaaactttgtgtct
aagtttaaacaggcgatggatgatgactttaatacgcctgaagcatattcagtattgttt
gatatggtgcgtgaggttaaccgtcttaaagtcactgatttagctcaagcttcggctctc
gcagtgcgtctaaaagagttggctggtgtacttggtatactcgagcaagatgtcgatagc
ttctttaaaggcgagagtaacgatgctgaagtcgctgaggttgaagcattaatcgcagag
cgtaatcgagcacgagctgagaaagattggcctgctgcggatatcgcccgtgatggactt
aacgccttaggtgtgattttggaagatggccctgaagggacaacgtggcgtaagaagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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