KEGG   Shewanella woodyi: Swoo_4714
Entry
Swoo_4714         CDS       T00676                                 
Name
(GenBank) tRNA 2-selenouridine synthase
  KO
K06917  tRNA 2-selenouridine synthase [EC:2.9.1.3]
Organism
swd  Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:swd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:swd03016]
    Swoo_4714
Enzymes [BR:swd01000]
 2. Transferases
  2.9  Transferring selenium-containing groups
   2.9.1  Selenotransferases
    2.9.1.3  tRNA 2-selenouridine synthase
     Swoo_4714
Transfer RNA biogenesis [BR:swd03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Swoo_4714
SSDB
Motif
Pfam: Rhodanese DUF1378 DUF3877 T2SSE Dna2
Other DBs
NCBI-ProteinID: ACA88964
UniProt: B1KN07
Position
5691816..5692922
AA seq 368 aa
MSRNIIPKTTYQEIMLSGHPMIDVRAPIEFDKGAFPSSSNFPLMQDSERQRVGTCYKEQG
QDAAIALGHSLVNGKVKQQRVDAWLAFIKQHPDAYLYCFRGGLRSQLSQQWIKEAGVDIP
YVEGGYKAMRQYLIEVIDNAPAKQPVFILSGITGSGKTDFLLQRSEAVDLEGYAHHRGSS
FGRYHEGQPTQINFENQLAVALLKHQERKEQCLLVEDESFLIGRSAIPKAFYEGMQNADI
LVLEEPEETRLTRLLNEYVHKMHSGYVERLGEEAGFTAFSEYLSQSITSIKKRLGSQLHD
EFQTIISKALNMQLQQNDTQGHLEWISLLLTRYYDPMYQYQLEQKQERVIFKGSHQAMHE
WLDHYRNR
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagcaggaacatcatccctaaaacgacctatcaagagatcatgctcagcggacatccg
atgatagacgttagggcaccgatagagttcgacaagggggcattcccctcgagttcgaat
tttcctctgatgcaggacagtgagcgtcagcgtgtaggaacctgttataaagagcaggga
caagatgccgctatcgcattaggccactctttagtgaatgggaaggtgaagcagcaaaga
gttgatgcctggctagcgtttatcaaacagcacccagatgcatatctctactgttttcgt
ggcggcttacgctctcaactttcgcagcaatggatcaaagaagctggtgttgatatcccc
tatgtcgaaggtggctacaaagccatgagacagtacctcattgaggtgatagataacgca
ccagccaagcagccagtgtttatccttagcgggatcaccggcagtggtaaaacagacttc
ctcctgcaaagatctgaggcggtcgaccttgaaggttatgcacaccacagaggctcaagt
tttggccgctaccatgaggggcaaccgactcaaattaactttgaaaatcagcttgctgtc
gctttacttaaacatcaagagagaaaagagcagtgtctacttgtcgaagatgagagcttt
ttgattggacgttcggctatccctaaagcattttatgaagggatgcagaacgccgatatt
ttagtactcgaggagccagaggagactaggctaacccgattactcaatgaatacgtacac
aagatgcactcaggttacgtggaaagattaggtgaagaagcgggtttcacggcctttagc
gagtacttaagtcagagcatcaccagtattaagaagcgactcggtagccagttgcatgat
gagtttcaaaccatcatctccaaagcattgaatatgcaattacaacaaaatgacactcaa
ggtcatcttgaatggatatcactgctgcttactcgatactacgatcctatgtatcagtat
cagctcgaacagaaacaggaaagggtcatcttcaaaggctcacatcaagcgatgcatgag
tggttagatcactatcgaaacaggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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