KEGG   Formicincola oecophyllae: E3E12_00430
Entry
E3E12_00430       CDS       T06093                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
swf  Formicincola oecophyllae
Pathway
swf03030  DNA replication
swf03430  Mismatch repair
swf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:swf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E3E12_00430 (dnaQ)
   03430 Mismatch repair
    E3E12_00430 (dnaQ)
   03440 Homologous recombination
    E3E12_00430 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:swf03032]
    E3E12_00430 (dnaQ)
   03400 DNA repair and recombination proteins [BR:swf03400]
    E3E12_00430 (dnaQ)
Enzymes [BR:swf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     E3E12_00430 (dnaQ)
DNA replication proteins [BR:swf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     E3E12_00430 (dnaQ)
DNA repair and recombination proteins [BR:swf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     E3E12_00430 (dnaQ)
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: QDH12920
UniProt: A0A4Y6U7C0
Position
complement(104225..104929)
AA seq 234 aa
MAGGIIFDTETTGFDPDDGDRVIEIAALKLNEDDMPLEGATFHVVIDPERDVPAESTRIH
GFRTEDVRGKPLFADIAQSFVDFVGDAKLIAHNASFDFKFINAELTRCGMRPYDYASRAV
DTLAIAKSRYTGPVNLDALCRRFGIDLSARTTHNALLDCQLLAQVYVELQGGRQRGLGLG
GEGAGIASPLARSLRPEPGRYAGRQARTWAVPEADKARHEAFLESVTDPLWRRA
NT seq 705 nt   +upstreamnt  +downstreamnt
atggctggtggcatcatcttcgatactgagacgacaggcttcgaccctgatgacggcgac
cgcgttattgagattgcggcgctcaagctcaatgaagacgacatgcccctggaaggggcc
acgtttcatgtggtgatcgaccctgaacgtgacgttccggcggaatccacccgcattcac
ggcttccgcacagaggatgtgcgcggcaagcccttgtttgccgacatcgcgcaaagcttt
gtggatttcgtaggcgatgccaagctcatcgcgcacaatgcgagcttcgatttcaagttc
atcaatgccgagctgacacgctgtggtatgcggccctatgattatgcaagccgcgctgtg
gacacactggccatcgccaaaagccgctacacagggcctgtgaacctggacgccctctgc
cggcgctttggcatcgacctttcagcgcgcaccacccacaacgcgttgctagactgccag
cttctggcccaagtctatgtggaactacaaggcgggcgccaacgtggccttggcctgggg
ggggagggagcagggatagccagccccctggcgcgcagcctgcgccccgaacctgggcgt
tacgctggccgccaagcccgcacatgggctgtgccagaggctgacaaggcccggcatgag
gcctttttggaaagcgtcacagaccctttgtggcgccgcgcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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