KEGG   Formicincola oecophyllae: E3E12_02455
Entry
E3E12_02455       CDS       T06093                                 
Name
(GenBank) rRNA pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
swf  Formicincola oecophyllae
Brite
KEGG Orthology (KO) [BR:swf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:swf03009]
    E3E12_02455
Enzymes [BR:swf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     E3E12_02455
Ribosome biogenesis [BR:swf03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    E3E12_02455
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: QDH14309
UniProt: A0A4Y6U9Z7
Position
542073..543068
AA seq 331 aa
MAGTHERAEPPTHGERIAKALARAGVASRREAERMVEEGRVHLNGQPVTHPATLVGPDDR
MSVDGKAVAAPDRPRLWRYAKPAGLVTTHHDPENRPTVFENLPPGLPRVISVGRLDLNSE
GLLLLTNDGELARALEMPSRHWPRRYRVRVYGYVDPRKLESLAKGCVVDGVRYGPIEARL
ETNQDLNRQERTGAASDNNQNKPRQPIPRAFSGRSGNSWLIVTLHEGKNREIRKVLASLG
LQVNRLVRLSYGPFRLGALRPSELEEVPGKVIADAVGKHLPGLKEAMKHKNRTHQAGTLG
SAGQAAGGTRVPGTNKAHKTARRPTPKTRRR
NT seq 996 nt   +upstreamnt  +downstreamnt
atggccgggacccatgaacgcgctgaaccgcccactcatggcgaacgcatagccaaggct
ttggcgcgcgctggtgtcgcctcccggcgggaggcagaacgcatggttgaggaagggcgt
gttcacctcaatgggcagcctgtcacccatccagcaaccttggtcggccctgatgaccgc
atgagtgtggatggcaaggccgtggcagcacctgaccggccacgactttggcgctatgct
aagcctgccgggttggtcaccacccaccatgaccctgaaaaccgccccaccgtttttgaa
aacctgccccctggcttgccgcgcgtcatcagtgtagggcggcttgacctcaattcagaa
gggttactgctgctgaccaatgatggtgaattggcacgcgccctggaaatgccctcacgc
cattggccgcgccgctacagggtgcgggtttacggttatgtcgaccccagaaagcttgaa
agcctggccaagggctgtgtggtggacggtgtgcgctacggccccatagaagcccgcctt
gaaaccaaccaggacctgaaccgccaggaacgcactggggcggcaagcgacaataaccag
aacaagccacgccagcccattccacgcgccttttcaggccgttcaggcaatagttggctg
atcgtcacgctgcatgagggcaaaaaccgtgagatccgcaaagtcctggcttcactgggg
ctgcaagtcaaccgtcttgtcaggctatcttatgggcctttccgcttaggtgcgctcagg
ccatcagaattggaggaagtgcctggcaaagtgattgctgacgctgttggtaaacacctt
cctggtttgaaggaggccatgaagcacaaaaaccgcacccaccaggcaggcacgttaggc
agtgctgggcaggctgctggtggaacacgtgtgccaggcaccaacaaagcacacaaaacg
gcccggcgccctaccccaaaaacgcggcgccgctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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