KEGG   Formicincola oecophyllae: E3E12_06400
Entry
E3E12_06400       CDS       T06093                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
swf  Formicincola oecophyllae
Pathway
swf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:swf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    E3E12_06400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:swf03021]
    E3E12_06400
   03400 DNA repair and recombination proteins [BR:swf03400]
    E3E12_06400
Enzymes [BR:swf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     E3E12_06400
Transcription machinery [BR:swf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     E3E12_06400
DNA repair and recombination proteins [BR:swf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      E3E12_06400
SSDB
Motif
Pfam: RNA_pol_Rpb6 Chalcone_2
Other DBs
NCBI-ProteinID: QDH13879
UniProt: A0A4Y6U8T9
Position
1459147..1459497
AA seq 116 aa
MARVTVEDCIEKVPNRFDLILLAARRARGLARGEEMTLPRDNDKNTVVALREIADSTISL
DNLREGIIRSIGRQPELESADEEVQDLIPTDQNIFGLQDVSAEEEVAAMNMDEPRG
NT seq 351 nt   +upstreamnt  +downstreamnt
atggcacgcgtgacagttgaagactgcattgaaaaagtccctaaccgctttgacctcatc
ctgctggcggcgcggcgtgcccgtggcctggcacgtggcgaggaaatgaccctcccccgc
gacaacgacaagaacacggttgtggctttgcgcgaaatcgccgacagcaccattagcctc
gacaatctgcgcgaggggatcatccgttccatcggccgccagcctgagcttgaaagcgct
gatgaggaggtgcaggacctcatccccactgaccagaacatcttcggcctacaggatgtc
tccgctgaggaggaagtggccgccatgaacatggatgagccgcgcggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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