KEGG   Formicincola oecophyllae: E3E12_06540
Entry
E3E12_06540       CDS       T06093                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
swf  Formicincola oecophyllae
Brite
KEGG Orthology (KO) [BR:swf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:swf03016]
    E3E12_06540 (truA)
Enzymes [BR:swf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     E3E12_06540 (truA)
Transfer RNA biogenesis [BR:swf03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    E3E12_06540 (truA)
 Prokaryotic type
    E3E12_06540 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: QDH13898
UniProt: A0A4Y6UBE8
Position
complement(1487129..1487974)
AA seq 281 aa
MSTLPQPAAHGQRTWADPARDKSGPRPERWAIKVEFDGTDYVGWQKQKSGLAIQQLIEEA
ATQLSSGQPVPSITSGRTDSGVHAAGLVAHLDFPPGSNLTAHALAGALNYRLKPHPVVVL
QAAPVSLSWNARFSATWRRYRYSILNRRARPALQARTMTHVPYPLDVSAMRAASQHLLGH
HDFSSFRAAACQARDALRTLDELTIHQEGDVIFMETQARSFLHHQVRNMVGTLVQVGRGR
WHPDDVKRILQARDRTQAGPTAPATGLCFMAVGYDEDPFAS
NT seq 846 nt   +upstreamnt  +downstreamnt
atgagtaccctcccccagccggcagcacatggccaacgcacctgggcggaccctgcgcgt
gacaagtcaggcccacggccagagcgctgggccatcaaggtggagtttgacggcactgat
tacgttggctggcagaagcagaaatcaggcttagccattcaacagctgattgaggaagcc
gcaacgcagctcagctcaggccagcctgtgcccagcatcacgtcagggcggacggattca
ggcgttcatgccgcagggctggtggcgcacctggacttcccgcctggttccaacctcaca
gcccatgctttggctggcgcgctgaattaccgcctcaagccgcaccctgtggtggtgctg
caggctgcccctgtcagtttgtcatggaatgcgcgtttctccgccacatggcggcgctac
cgctacagcatcctgaaccgccgcgcccgccctgccctccaggcgcgcactatgacccac
gtgccctatccgcttgatgtcagcgctatgcgcgctgcaagccagcatttgctggggcac
cacgatttctcctctttcagagcggcggcttgccaagcccgtgacgctttgcgcacgctt
gatgaactgaccatccaccaggagggggacgtgattttcatggaaacccaggcccgttca
ttcctccaccaccaagtgcgcaacatggtgggcacgctggtgcaagttgggcgcgggcgc
tggcaccctgatgacgtaaagcgcatcctgcaggcgcgtgaccgcacccaggctggcccc
acagcccccgccacggggctgtgcttcatggctgtgggctatgatgaggacccctttgcc
tcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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