KEGG   Rhizorhabdus wittichii RW1: Swit_0165
Entry
Swit_0165         CDS       T00538                                 
Name
(GenBank) P-type conjugative transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
swi  Rhizorhabdus wittichii RW1
Pathway
swi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:swi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Swit_0165
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:swi02044]
    Swit_0165
Secretion system [BR:swi02044]
 Type IV secretion system
  Trb secretion system protein
   Swit_0165
SSDB
Motif
Pfam: DUF948 DUF4141 Laminin_II TPR_MLP1_2 BBS2_N Jnk-SapK_ap_N KxDL HisKA LXG DUF3450
Other DBs
NCBI-ProteinID: ABQ66536
UniProt: A0A9J9H7T4
Position
158192..158926
AA seq 244 aa
MTPIRTFFVGAAALALLAAPPASAQITVYDPTNYSQNLLSAARALQQINNQITSLQNEAA
MLLNQARNLTSLPTSTLSQIQQSMDRTRQLIGEARQIAYNVQDIDRVFDQRYPAGSLAGT
SHGQMVGNAEDRWRDAVASFQDALRTQATIVTNLTDTRRELDTLVGASQDATGALQAAQA
GNQLVALQTRQIADLTALVAAQGRAAAIEAARAAADEAQARERGRRFIGTRSEYRPRSVT
IFND
NT seq 735 nt   +upstreamnt  +downstreamnt
atgacccctatccgcaccttctttgtcggcgccgccgcgctggcgctgctcgccgcgccg
cccgcgtccgcgcagatcacggtctatgacccgaccaactactcgcagaacctgctctcg
gcggcccgcgcgctccagcagatcaacaaccagatcacctcgctgcagaacgaggcggcg
atgctcctcaatcaggcgcgcaacctgacctcgctcccgaccagcaccttgtcgcagatc
cagcagtcgatggaccgcacgcgccagctgatcggcgaggcgcgacagatcgcctacaat
gtccaggacatcgaccgcgtgttcgaccagcgttatccggcgggatcgctcgccggaacc
agccacggccagatggtcgggaacgcggaagaccgctggcgcgatgcggtggcgagcttc
caggatgcgctgcgcacgcaagcgacgatcgtcaccaacctcaccgacacccgccgcgag
ctcgacactctggtcggggccagccaggacgcgaccggcgcgctgcaggcggcgcaggcg
gggaaccagctcgtcgcgctccagaccaggcagattgcggacctgaccgcgctggtcgcc
gcgcagggccgcgccgccgcgatcgaggcggcgcgcgccgcagcggacgaggcgcaggcg
cgcgagcgcggtcgccggttcatcggtacgcgcagcgaatatcgtccgcgcagcgtgaca
atcttcaatgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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