KEGG   Rhizorhabdus wittichii RW1: Swit_0168
Entry
Swit_0168         CDS       T00538                                 
Name
(GenBank) Conjugal transfer protein
  KO
K20531  type IV secretion system protein TrbF
Organism
swi  Rhizorhabdus wittichii RW1
Pathway
swi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:swi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Swit_0168
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:swi02044]
    Swit_0168
Secretion system [BR:swi02044]
 Type IV secretion system
  Trb secretion system protein
   Swit_0168
SSDB
Motif
Pfam: VirB8 XPB_DRD
Other DBs
NCBI-ProteinID: ABQ66539
UniProt: A0A9J9H8H5
Position
160603..161292
AA seq 229 aa
MNPFRRPSSRFGREPKPETPYQRAQQAWDDRIGSARAQAYSWRLMAFGAIAVLGLSAADN
LRLRYGTKVVPYVVEVDRLGAARAVAPLEAGYRPTDPQIAWHLARFIENVRARPADPIVL
RQNLSAAYDFTTEQGAASLNDYARANDPFASLADTQVGVDIRNVVRASADSFRIAWDERR
YVRGQLATTTRWSAVLTIVVRTPTDAPTLSRNPLGLYVHALNWSQDLGD
NT seq 690 nt   +upstreamnt  +downstreamnt
atgaatccctttcgccgcccctcgtcgcggttcggccgcgagccgaaacccgagacgccc
tatcaacgtgcccagcaggcctgggacgatcgcatcggctccgcgcgggcgcaggcctac
agctggcggctgatggcgttcggcgcgattgcggtgctcggcctgtcggccgccgacaat
ctgcgcctgcgctacggcacgaaggttgtgccctatgtggtcgaggtcgatcgcctcgga
gcggcgcgcgccgtcgctcctttggaggccggctatcggccgaccgatccgcagatcgcg
tggcacctcgcccgcttcatcgagaatgtccgcgcccggcccgccgatccgatcgtgctg
cggcagaatctgagcgccgcctatgatttcacgaccgagcagggcgcggcgtcgctcaat
gactatgcccgcgccaacgacccgttcgccagtctcgccgacacccaggtcggggtcgac
atccgcaatgtcgtgcgcgcctcggccgacagcttccgcatcgcctgggacgagcgccgc
tatgtgcggggccagctggccacgacgacgcgctggtcggcggtgcttaccatcgtcgtg
cgcaccccgaccgacgccccgacgctgagccgcaacccgctcggcctctacgtccacgcc
ctcaactggtcccaggatctcggagactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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