KEGG   Rhizorhabdus wittichii RW1: Swit_2928
Entry
Swit_2928         CDS       T00538                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
swi  Rhizorhabdus wittichii RW1
Pathway
swi00300  Lysine biosynthesis
swi00470  D-Amino acid metabolism
swi01100  Metabolic pathways
swi01110  Biosynthesis of secondary metabolites
swi01120  Microbial metabolism in diverse environments
swi01230  Biosynthesis of amino acids
Module
swi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:swi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Swit_2928
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Swit_2928
Enzymes [BR:swi01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     Swit_2928
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: ABQ69280
UniProt: A5VAG4
Position
3216664..3217488
AA seq 274 aa
MQVRFHKMHGLGNDFVVIDARATAPVEMTAARARALADRKTGVGCDQLILLEPSAVADAR
MRIFNADGSEVEACGNATRCVVSLLGGSARIETVAGLLEGRSADGQVSVELGEPRFDWDA
IPLAYAMDTRAMPVAWEELEAPMAANVGNPHVVFFVPETDAVALDRLGPRIETDPLFPAR
INVNVATVDDRANIRLRVWERGVGLTDACGTGACATAVSAIRAGLVDSPVRVTLPGGPLT
IDWAPGRPIVMTGPATHVFTAETDLSAFGADSRG
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcaggtccgctttcacaagatgcacggtctcggcaatgatttcgtcgtgatcgatgcc
cgcgccaccgcgccggtcgagatgaccgcggcgcgcgcgcgggcgcttgccgaccgcaag
accggggtgggctgcgaccagctcatcctgctcgaaccgtccgccgtcgccgacgcgcgg
atgcggatcttcaacgccgacggcagcgaggtcgaggcgtgcggcaacgccacacgctgc
gtcgtcagcctgctcggcggcagcgcgcggatcgagacggtcgccgggctgctcgaaggc
cgcagcgccgacgggcaggtgtcggtcgagctcggcgagccgcgcttcgactgggacgcg
atcccgctcgcctatgcgatggacacccgcgcgatgccggtcgcctgggaggagctcgag
gcgccgatggccgccaatgtcggcaatccgcacgtcgtcttcttcgtgcccgagaccgac
gcggtcgcgctcgaccggctcgggccgcggatcgagaccgatccgctgttccccgcgcgg
atcaacgtcaacgtcgcgacggtcgacgaccgggcgaacatccgcctgcgcgtgtgggag
cgcggcgtcggcctgaccgacgcctgcggcaccggcgcctgcgcgacggcggtgtcggcg
atccgcgccgggctggtcgactcgccggtgcgggtgacgctgcccggcgggccgctgacg
atcgactgggcgcccggccggcccatcgtcatgaccggccccgccacccatgtcttcacc
gccgagaccgacctgagcgccttcggggccgacagccgcggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system