KEGG   Rhizorhabdus wittichii RW1: Swit_3700
Entry
Swit_3700         CDS       T00538                                 
Name
(GenBank) conjugation TrbI family protein
  KO
K20533  type IV secretion system protein TrbI
Organism
swi  Rhizorhabdus wittichii RW1
Pathway
swi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:swi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Swit_3700
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:swi02044]
    Swit_3700
Secretion system [BR:swi02044]
 Type IV secretion system
  Trb secretion system protein
   Swit_3700
SSDB
Motif
Pfam: TrbI gp12-short_mid
Other DBs
NCBI-ProteinID: ABQ70046
UniProt: A0A9J9HE03
Position
4063140..4064357
AA seq 405 aa
MTDPADNSPPEAAAPQAPRPDPQAFQLRGDPPRVMRLSRKALAAIGVVAGLGIGGSLIYA
LKPAGEKEAKELYSTDSRATSETITSGPRDYSQAPKLGPPLPGDLGGPIVSAQQRGENVP
VPPVGAQPDPRAQAEEAARQRISQERDAARMSGVFLGGSSTGAAAMPSLPNLAIATPDAT
APQPAEAAQGDQAAKRAFMAQASSQRTVSVERLTAPASPNIVQAGSIVPAALITGIRSDL
PGQITAQVTANVYDSPTGRILLIPQGARLIGEYDSEIAAGQTRVLLAWDRLIMPDGRSIV
LERQPGADAAGYAGLQDRVNQHWGNLLKAAAVSTLLGVGAELGADSEDDLTRALRRGSQD
TINQTGQQIVRRQLNVQPTLTIRPGHPLRVVLTRDLVLEPVGGAR
NT seq 1218 nt   +upstreamnt  +downstreamnt
gtgaccgatccggccgacaactccccgcccgaggcggccgcaccgcaagcgccgcgccct
gatccgcaagccttccagcttcgcggcgacccgccgcgcgtcatgcgcctgtcgcgcaag
gcgctggccgccatcggcgtcgtcgccggcctcgggatcggcggctcgctgatctatgcg
ctcaagccggcaggcgagaaggaggcgaaggaactctacagcaccgacagccgcgctacc
tccgagaccatcacatcgggaccgcgcgactacagccaggcgccgaaactcggcccgccg
cttcccggcgacctcggcggcccgatcgtctcggcgcagcagcgtggggagaatgtcccg
gtcccgcccgttggcgcccagcccgatccgcgcgcccaggccgaggaagccgcccgccag
cgcatcagccaagagcgcgacgcggcgcgcatgagcggcgtgttcctcggcggcagcagc
accggggccgctgcgatgccttcgttgccgaacctcgcaatcgcaacgcccgacgctacc
gctccgcagccggccgaggccgcgcagggcgaccaggccgccaagcgcgccttcatggcg
caggcgtccagccagcggacggtcagcgtcgagcgcctgaccgcgccggcctcgcccaac
atcgtgcaggcgggcagcatcgtgcccgcggcgctcatcaccggcatccgctccgatctc
cccggccagatcactgcccaggtgacggccaacgtctatgacagccctaccggccgcatc
ctgctcatcccgcaaggggcgcggctgatcggcgaatatgacagcgagatcgccgccggg
cagactcgcgtgctgctggcatgggatcggctcatcatgccggacggccgctcgatcgtt
ctcgagcgccagcccggcgccgatgcggccggctatgccggcttgcaggatcgcgtgaac
cagcattggggcaatctgctcaaggcggctgccgtctcgacgctgctcggcgtgggggcc
gagctgggcgcggacagcgaggatgacctgactcgcgccctgcgccgcgggtcgcaggat
accatcaaccagaccggccagcagatcgtgcggcggcagctcaacgtgcagccgacactc
accatccggcccgggcatccgttgcgcgtggttctgacccgcgacctcgtattggagccg
gttggaggcgcacgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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