KEGG   Rhizorhabdus wittichii RW1: Swit_5382
Entry
Swit_5382         CDS       T00538                                 
Name
(GenBank) TraH family protein
  KO
K12072  conjugative transfer pilus assembly protein TraH
Organism
swi  Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:swi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:swi02044]
    Swit_5382
Secretion system [BR:swi02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   Swit_5382
SSDB
Motif
Pfam: TraH
Other DBs
NCBI-ProteinID: ABQ71490
UniProt: A0A9J9HGN6
Position
pSWIT01:287537..289000
AA seq 487 aa
MARKSSGRARAAIRRLAHGAAILAASHFALVGVAHADVAGQMNSFFNDAGGAANVTGPSA
FQGQSAGYYSMGNVWTRFPQKSVSPFNLQLPSARAGCGGIDLFSGSFSFINASEIVAMLK
ATANNALGFAFKLAIDSVSPEIGKVMDEFSQKAQLLNQMNISSCETAQALVGGIWPQMDT
TRSTICEAIGNSQGIFSDWAASRQGCNNGNQRDNTIAGNSDASMKDQLVGEPHNYTWEAL
KKAGKFGAFDQSFSEFIMTLVGTVITKPSDDPSVGGKVVMIGPAEDAVVTALLDGTADAP
PVKLLKCNDENCYEVGEQTLSVPASSALRPRIEALIQSMNDKIRSDTPLDAAEKQLLNIA
TVPIFKILSVQAYAHYSLSPGEIQAMSEIVAVDLLTAMLDNMMDRVEQSQVHYQTFDQAT
AAQWKAQIAAARAKYAQRDVKLNNKLQVTMQLINRSMMLESTLQNSMTPGMASALTFSRG
LSSQGLN
NT seq 1464 nt   +upstreamnt  +downstreamnt
atggcacgcaagagttccggacgggcacgggcggcgatccggcgcctcgctcatggcgcc
gccatattggcggcatcgcatttcgcgctggtgggcgttgcccatgccgatgtcgcgggc
cagatgaacagcttcttcaacgacgcgggcggtgcggccaatgtgacgggcccaagcgcc
ttccagggccagtcggccggctactattcgatgggcaacgtctggacgcgcttcccgcag
aaatcggtgtcgccgttcaacctgcagttgcccagtgcccgggcgggctgcggcggcatc
gacctcttttccgggtccttctccttcatcaatgcctccgagatcgtggcgatgctcaag
gccaccgccaacaacgcacttggctttgccttcaagctcgcgattgattccgtatctccg
gaaatcggcaaggtgatggacgagttcagccagaaggcgcagctcctcaaccagatgaac
atctcgagctgcgagaccgcgcaggcgctggttggcggcatctggccgcagatggacacc
acccgctcgaccatctgcgaagccatcggcaacagccagggcatattctcggactgggcc
gcctcacggcagggctgcaacaacggcaaccagcgcgataacacgatcgccggaaacagc
gatgcgtcgatgaaggaccagcttgtcggcgagccgcataactatacctgggaggccttg
aagaaggcaggcaagttcggcgcgttcgaccagagcttctccgaattcatcatgaccctg
gtcggcacggtaatcacgaagccgtcggacgatccgagtgtcggcggcaaggtcgtgatg
atcggcccggccgaagacgccgtggtaaccgcgcttctggatggtacggccgatgcgccg
ccggtgaagctcctcaaatgcaacgacgagaactgctacgaggtcggcgagcagacgctg
tcggtgccagcatcgtccgcgttacgcccgcggatcgaagcgctgatccagtcgatgaac
gacaagatccgcagcgatacgccactcgatgccgcggaaaagcagcttctgaacatcgcg
acggtgccgattttcaagatcctgagcgtccaggcttatgcgcattactcgctgtcgccc
ggcgagatccaggcaatgtcagagatcgtcgcggtcgacctgttgaccgctatgctcgac
aatatgatggaccgggtcgagcaaagccaggttcattaccagaccttcgaccaggctacc
gcggcccagtggaaggcgcagatcgccgctgcccgcgctaaatacgcgcagcgcgacgtc
aagctcaacaacaagctgcaggtcacgatgcagctcatcaaccgcagcatgatgctcgag
tccaccctgcagaattcgatgacgccgggcatggcttcggcgctgaccttctcgcgcggg
ctgagctcgcaggggctgaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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