KEGG   Shewanella piezotolerans: swp_1538
Entry
swp_1538          CDS       T00791                                 
Name
(GenBank) Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4
  KO
K02405  RNA polymerase sigma factor FliA
Organism
swp  Shewanella piezotolerans
Pathway
swp02020  Two-component system
swp02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:swp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    swp_1538
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    swp_1538
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:swp03021]
    swp_1538
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:swp02035]
    swp_1538
Transcription machinery [BR:swp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     swp_1538
Bacterial motility proteins [BR:swp02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    swp_1538
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 UPF0122 HTH_23
Other DBs
NCBI-ProteinID: ACJ28322
UniProt: B8CKZ6
Position
1583483..1584202
AA seq 239 aa
MNKAAAYTSLDNKTSIVEQYAPLVKRIAHHLLARLPASVQLDDLLQAGMMGLLEASSKFD
GSKGAKFETFAGIRIRGSMLDEIRRGDWVPRSVHRNQRRVAQVIDELEQELGRDARDPEI
AERLEMSLDEYYSILNDVSVGKVVGIEDLGVAVDVVNHEDNHDDVAYESLAEVEFHSALV
AAIKLLPERDALVLSLYYDEALNLKEIGAILEVSESRVSQIHSQAMLRLKGKLKHWTQT
NT seq 720 nt   +upstreamnt  +downstreamnt
gtgaataaagcggccgcgtatactagtttagataataagacctctatcgttgaacagtat
gcaccgctagtaaaaagaattgcccatcatttattggcgcgcttaccggcgtcagtgcag
ttagatgatttgctgcaagcaggtatgatggggctgttagaggcatcatcaaagtttgat
ggtagtaaaggcgcgaaatttgaaacctttgcaggtattcgaattcgcggctctatgtta
gacgaaataagacgcggtgattgggtaccgcgatcagtacatcgcaatcagcgccgagtt
gcgcaagtgattgatgagctagagcaagagcttggccgcgatgcacgagatccagagatt
gcagagcgtttagagatgtcgctcgacgagtattacagcattctaaatgatgtgtcagtg
ggcaaagttgttggcattgaagatttaggtgtcgcggtcgatgtggttaaccacgaagat
aaccatgatgatgttgcttatgagtcgctagctgaagttgaatttcattcagcattagtg
gccgcgataaagctattaccagaacgtgatgctctggtattgtcactgtattacgatgaa
gcattaaatttaaaagagattggggccattcttgaggtcagtgagtctagagttagccag
atccatagtcaggcgatgctaaggctcaagggtaaactcaagcactggacgcaaacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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