KEGG   Shewanella piezotolerans: swp_2518
Entry
swp_2518          CDS       T00791                                 
Name
(GenBank) Pseudouridylate synthase, 23S RNA-specific
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
swp  Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:swp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:swp03009]
    swp_2518
   03016 Transfer RNA biogenesis [BR:swp03016]
    swp_2518
Enzymes [BR:swp01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     swp_2518
    5.4.99.29  23S rRNA pseudouridine746 synthase
     swp_2518
Ribosome biogenesis [BR:swp03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    swp_2518
Transfer RNA biogenesis [BR:swp03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    swp_2518
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ACJ29258
UniProt: B8CP14
Position
2639453..2640223
AA seq 256 aa
MNRQACCMIVAYFIVQTVSHMSQVVDDFIAPPCYEEITILYQDEVMLLINKPSGLLSLSG
KNPANLDSVHYRLVKLFPGCSLVHRLDFGTSGIMVIALNKDINALLCRQFSERSVLKRYT
AILLGELKEDKGVICAAIAKDKPNFPLMKLCELEGKAARSLYQVLSKEYLGSANSAAERA
LDEVSVTRVELTPETGRTHQLRIHSQYIGHPIIGCDLYGSAYSRQLASRLMLHATRLEFD
HPVTGVRVLGYSPCPF
NT seq 771 nt   +upstreamnt  +downstreamnt
ttgaatcgccaagcatgctgtatgattgttgcctattttattgtacaaacggtttcacat
atgtcccaagtggttgatgattttattgcgcctccttgttatgaagagataaccattctc
taccaagatgaggtgatgcttcttattaacaaaccatctggattgctgtcattatcaggt
aaaaatccagcaaatcttgactctgtacattaccgtttagttaagctgtttccaggctgc
tctttggtgcatcggctagatttcggtacgtctggaataatggttatcgcgcttaacaag
gacatcaatgcgttactatgtcgtcaatttagtgaacgaagcgtgctaaaacgctatacg
gcaatattactcggtgagctcaaagaagataaaggcgtgatttgtgcggcaatcgctaaa
gataagcctaattttccattgatgaagctatgtgagctggagggcaaagctgcgcgctcg
ctctatcaggttttatcgaaagagtatttaggaagtgcaaattcggctgcggaaagagcc
cttgatgaagttagtgtgacaagagttgaattgactcctgaaacaggcagaacgcatcaa
cttaggatccatagccagtatattggccaccctataataggttgtgatctttatggctcg
gcttattcacgtcagcttgcatcaagactgatgctgcatgctactaggctagagttcgat
catccggttacgggcgtaagagtgcttggttacagcccatgccccttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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