KEGG   Streptomyces xiamenensis: SXIM_03730
Entry
SXIM_03730        CDS       T03904                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
sxi  Streptomyces xiamenensis
Pathway
sxi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sxi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SXIM_03730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sxi03400]
    SXIM_03730
Enzymes [BR:sxi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SXIM_03730
DNA repair and recombination proteins [BR:sxi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SXIM_03730
    RecFOR pathway proteins
     SXIM_03730
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_16 TIP49 Mg_chelatase GGDEF_2 Sigma54_activat nSTAND3 AAA_14 AAA_3 DUF815 RNA_helicase Sigma54_activ_2 Zeta_toxin TsaE AAA_28 AAA_25 MeaB AAA_18 NTPase_1 AAA_19
Other DBs
NCBI-ProteinID: AKG41757
UniProt: A0A0F7FQR2
Position
complement(425575..426645)
AA seq 356 aa
MNWDEEPPQDTGRLVGATAEGEELAAEAALRPKDLTEFVGQPKVREQLDLVLRAARARGG
TADHVLLSGAPGLGKTTLSLIIAAEMGAPIRITSGPAIQHAGDLAAILSSLTEGEVLFLD
EIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELPPFTLVGATTRAGLLPPPLRD
RFGFTGHMEFYAPAELERVIQRSARLLEVETTDGGAAEIAGRSRGTPRIANRLLRRVRDY
AQVKGDGVVTREAASRALAVFEVDGRGLDRLDRSVLEALLKLFGGGPVGLSTLAVAVGEE
RETVEEVAEPFLVREGLLARTPRGRVATPAAWEHLGLRPPQGTAAVGGPPEGLFES
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgaactgggacgaagagccaccgcaggacaccggccggctggtgggcgccaccgccgag
ggggaggaactggcggcagaggccgcgctgcggcccaaggacctgacggaattcgtcggc
cagcccaaggtccgtgagcaactggacctggtgctgcgcgccgcccgtgctcgcggcggc
accgccgaccacgtgctgctctcgggtgcccccgggctcggcaagaccacgctgtccctg
atcatcgccgccgagatgggcgcccccatccgcatcacctcggggcccgccatccagcac
gccggtgatctcgccgcgatcctgtcctcgctcaccgagggcgaggtgctgttcctcgac
gagatccaccggatgtcccggccggccgaggaaatgctctacatggccatggaggatttc
cgggtcgacgtcatcgtcggcaagggccccggtgccaccgccatcccgctggagctgccg
cccttcaccctggtcggggccaccacccgggccggactgctgccaccgccgctgcgcgac
cgcttcggcttcaccggccacatggagttctacgcccccgccgaactggagcgggtgatc
cagcgctccgcgcggctgctggaggtggagaccaccgacggcggagcggcggagatcgcc
ggccgctcccggggaaccccccgcatcgcgaaccggctgctgcgccgggtgcgggactac
gcccaggtcaagggggacggggtggtcacgcgggaggcggcgtcccgggccctggcggtc
ttcgaggtggacggccggggccttgaccggctggaccgctccgtcctggaagcgctgctg
aagctgttcggcgggggcccggtgggcctgtccacgctggccgtggcggtgggggaggag
cgggagaccgtcgaggaggtcgccgagccgttcctggtacgcgagggactgctggcgcgt
accccccggggccgggtggccacccccgccgcctgggagcacctcggactgcggcctccg
cagggcacggcggcggtcggcgggccaccagaaggcttgttcgagtcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (34)   

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