KEGG   Staphylococcus xylosus SMQ-121: SXYLSMQ121_0932
Entry
SXYLSMQ121_0932   CDS       T03311                                 
Name
(GenBank) RNA methyltransferase, TrmA family
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
sxl  Staphylococcus xylosus SMQ-121
Brite
KEGG Orthology (KO) [BR:sxl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sxl03009]
    SXYLSMQ121_0932
Enzymes [BR:sxl01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     SXYLSMQ121_0932
Ribosome biogenesis [BR:sxl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SXYLSMQ121_0932
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Met_10 Methyltransf_15 Methyltransf_25 TRAM Cons_hypoth95 MTS N6_N4_Mtase PrmA Methyltransf_11 MethyltransfD12 PDGF Methyltransf_23
Other DBs
NCBI-ProteinID: AID42363
Position
1022035..1023396
AA seq 453 aa
MNAIQKNEVVEGKVVDLTHEGHGVVKFDRYPVFVPNALIDEIIEFKVIKVKKNFAIGKLI
TIKEQSESRIEPPCVYYYKCGGCQLQHMTYQAQLNMKKEQVVNLFQRKAGFKDVVIHDTI
GMDNPWYYRNKSQIPVGKNNEHEIITGFYRQRSHDIIDMDECLIQDSLHQDVINKVKVWF
NELNVSVYNEHQKQGLMRHVVIRTGHHSRELMVIFVTNGKKFKQSDVITERLVADFPEIV
SVKQNINTTHSNVIMGDNSYTLYGKDEIEDTLSDVTFKINDQSFYQINSIQTEKLYQRAI
EYAELQGEEVVLDTYCGIGTIGLYMAPKAKHVYGVEVVPEAIKDAQLNATINQFENTTFV
CGKAEDVILKWESEGIKPDVVMVDPPRKGCDETFLETLLELNPKKIVYISCNPSTQQRDA
QLLAQHYKLTQITPVDMFPHTTHVETVAQFERL
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgaacgcaattcaaaaaaatgaagtcgtagagggcaaagttgtagatttaacgcatgaa
ggtcatggtgttgttaaatttgatcgttatcctgtttttgttcctaatgcattaattgac
gaaataattgaatttaaagtgattaaagtaaaaaagaattttgcaataggtaaactaatc
actattaaagaacaaagtgagtcacgtatagaaccaccatgtgtctattattataaatgt
ggtggctgtcagttacagcatatgacttatcaagcgcaattaaatatgaaaaaagaacaa
gtggtgaatttatttcaacgaaaagcaggatttaaagatgttgttatacacgatacaatt
ggaatggataacccttggtattacagaaataaatcacaaattccagtaggaaaaaataat
gagcatgaaataataacagggttttatcgtcagcgcagtcatgacataatcgatatggat
gaatgtttaatacaagacagtttacatcaagatgtaataaataaggttaaagtatggttt
aacgaacttaatgtgagtgtttataatgaacatcagaagcaaggattaatgcgtcatgtc
gttattagaactgggcaccactcaagagaattaatggtaatctttgtcactaatggcaaa
aagtttaaacaaagtgatgttataactgagagattagtagctgactttccagaaattgtc
agtgttaaacaaaatataaatacaacacattccaatgtaattatgggagataattcatat
actttatatggaaaagatgagattgaagatacattatctgatgttacattcaaaataaat
gaccaatcgttttatcaaattaattctatacagactgaaaagttatatcaacgtgctata
gaatatgctgaactacaaggtgaagaagtagtgcttgatacgtattgtggtattggtact
attggattatacatggctccaaaagcgaaacatgtctatggggttgaagttgtacctgaa
gcaataaaggatgcgcagttaaatgcgactataaaccaatttgaaaatactacttttgtc
tgtggtaaggctgaagatgttatcttaaaatgggaatcagaaggaattaaaccagatgta
gtaatggttgatccaccgcgtaaagggtgtgacgaaacatttttggaaactttattagaa
ttaaaccccaaaaagatcgtctacatttcctgcaatccatcgacacagcagcgcgatgct
caattactagcacaacattataaattaacccaaataacacctgtagatatgtttcctcat
acaacgcacgttgaaacagttgcacaatttgagagactttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (22)   

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