KEGG   Sphingobium yanoikuyae: A6768_25320
Entry
A6768_25320       CDS       T05170                                 
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
sya  Sphingobium yanoikuyae
Pathway
sya00020  Citrate cycle (TCA cycle)
sya00190  Oxidative phosphorylation
sya00650  Butanoate metabolism
sya01100  Metabolic pathways
sya01110  Biosynthesis of secondary metabolites
sya01120  Microbial metabolism in diverse environments
sya01200  Carbon metabolism
Module
sya_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sya_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sya_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:sya00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    A6768_25320
   00650 Butanoate metabolism
    A6768_25320
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    A6768_25320
Enzymes [BR:sya01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     A6768_25320
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C GIDA Pyr_redox_2 Thi4 DAO
Other DBs
NCBI-ProteinID: ATI82994
UniProt: A0A084ETV3
Position
5432374..5434188
AA seq 604 aa
MSEAYKIIDHTYDTVVVGAGGSGLRATMGSAEAGLKTACITKLFPTRSHTVAAQGGIAAS
LGNNSPDHWTWHMYDTVKGSDWLGDQDAIEYMVREAPAAVIELEHAGVPFSRNQDGTIYQ
RPFGGHMQNMGAGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFYIEYFAIDLIMEDGP
NGKECRGVIAICMEDGSIHRFRSHAVVLATGGYGRAYFSATSAHSCTGDGGGMVLRAGLP
LQDLEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSRS
MAMEMREGRGVGEHKDHIFLHLDHIDPKVLAERLPGITESGKIFAGVDLTRQPLPVTPTV
HYNMGGIPCNYHGQVVTKVGDDPEVVVPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGR
ATGLFLKDNLKPNTPHKPLPANAADLALSRLDHYRNANGTTSTADIRMDMQRTMQKHAAV
FRDSELLADGVVKMQAVNKRLQDVKIADRSLIWNTDLIETLELDNLMSQAICTMEGAEAR
KESRGAHAHEDFPNRDDENWMKHTISWFEGWGGSGGKVTLDYRPVHDYTMTDEAEYIKPK
ARVY
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgagcgaagcctacaagatcatcgaccatacctacgacaccgtcgtcgtgggtgccggc
ggctcgggcctgcgcgccaccatgggcagcgccgaagcgggtctcaagaccgcctgcatc
accaagctgttcccgacccgcagtcacaccgtggcggcgcagggtggcatcgccgcctcg
ctcggcaacaacagccccgaccactggacctggcacatgtacgacaccgtcaaggggtcg
gactggctgggcgaccaggacgcgatcgaatatatggtgcgtgaagcaccggcggccgtg
atcgagctggaacatgccggcgtgccgttcagccgcaaccaggacggcaccatctatcag
cgtccgttcggcggccacatgcagaatatgggcgccggcccgccggtgcagcgcacctgc
gccgccgccgaccgtaccggccacgccatgctgcacgctctctaccagcagagcctgaag
tatgacgccgacttctacatcgaatatttcgccatcgacctgatcatggaagatggcccg
aacggcaaggaatgccgcggcgtcatcgccatctgcatggaagatggcagcatccaccgc
ttccgcagccatgccgtcgtgctggcgaccggtggctatggccgcgcctatttctcggcc
acttcggcccatagctgcaccggcgacggcggtggcatggtgctacgcgccggcctgccg
ctgcaggatctggaattcgtgcagttccacccgaccggcatctatggcgcgggcgtgctg
atcaccgaaggcgcgcgcggcgaaggcggctacctcaccaattccgaaggcgagcgtttc
atggaacgctatgccccgtcggcgaaggatctggcgtcgcgtgacgtcgtttcgcgctcg
atggcgatggaaatgcgcgagggccgcggcgtcggcgagcacaaggatcatatcttcctg
caccttgaccatatcgatcccaaggttctggccgagcgcctgccgggcatcaccgaaagc
ggcaagatctttgccggtgtcgacctgacccgccagccgctgcccgtgaccccgacggtc
cattataatatgggcggcatcccctgtaactatcatggccaggtggtgacgaaggtcggc
gacgatccggaagtcgtggtgccgggcctgttcgcggttggcgaagcggcctgcgtgtcg
gtccatggcgcgaaccgcctcggctccaactcgctgatcgaccttgtcgtgttcggccgc
gcaaccggcctgttcctcaaggacaatctgaagcccaacaccccgcacaagccgctgccg
gccaatgcggccgatctggcgctgtcgcgcctcgatcactatcgcaacgccaacggcacc
acctcgacggcggacatccgcatggacatgcagcgcaccatgcagaagcatgctgccgtg
ttccgcgacagcgaattgctggccgatggcgtcgtcaagatgcaggcggtcaacaagcgc
ctgcaggacgtcaagatcgccgaccgttcgctgatctggaacaccgacctgatcgagacg
ctggaactggacaatctcatgagccaggccatctgcacgatggaaggcgccgaggcccgc
aaggaatcgcgcggcgcccatgcgcatgaggatttcccgaaccgcgacgacgaaaactgg
atgaagcacaccatcagctggttcgaaggctggggtggttcgggcggcaaggttacgctc
gattatcgtccggtccacgactacacgatgaccgacgaggccgagtatatcaagccgaag
gcgcgcgtatactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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