KEGG   Sphingobium sp. YBL2: TZ53_01800
Entry
TZ53_01800        CDS       T03855                                 
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
syb  Sphingobium sp. YBL2
Pathway
syb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:syb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TZ53_01800 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:syb03019]
    TZ53_01800 (groEL)
   03110 Chaperones and folding catalysts [BR:syb03110]
    TZ53_01800 (groEL)
   03029 Mitochondrial biogenesis [BR:syb03029]
    TZ53_01800 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:syb04147]
    TZ53_01800 (groEL)
Enzymes [BR:syb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     TZ53_01800 (groEL)
Messenger RNA biogenesis [BR:syb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     TZ53_01800 (groEL)
Chaperones and folding catalysts [BR:syb03110]
 Heat shock proteins
  HSP60 / Chaperonin
   TZ53_01800 (groEL)
Mitochondrial biogenesis [BR:syb03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    TZ53_01800 (groEL)
Exosome [BR:syb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   TZ53_01800 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   TZ53_01800 (groEL)
  Exosomal proteins of breast cancer cells
   TZ53_01800 (groEL)
  Exosomal proteins of colorectal cancer cells
   TZ53_01800 (groEL)
  Exosomal proteins of bladder cancer cells
   TZ53_01800 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1 Pho88
Other DBs
NCBI-ProteinID: AJR22704
UniProt: A0A0C5X100
Position
361537..363156
AA seq 539 aa
MAAKEVKFASDARDRMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELADKFENMGAQMLREVANKQNDKAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DLAVGAVVEDLKSHAKKVGANSEIAQVATISANGDAEVGRILAEAMEKVGNEGVITVEEA
KSLETELETVEGMQFDRGYLSPYFITNAEKLKVELDDPYILIHEKKLSNLQALVPLLEKV
VQSGRPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGNV
VSEDLGIKLENVTVDMLGRAKKVTIDKDNTTIIDGVGQKTDIDGRVAQLRQQIETTTSDY
DREKLQERVAKLAGGVAVIRVGGATEVEVKEKKDRVDDALHATRAAVEEGILPGGGIALL
RAIKALDGLKAANDDQQSGIDIIRRALRAPARQIAENAGEDGAYIVGKLLESSEYNWGFN
AATAEYQDLVQAGVIDPAKVVRTALQDAASVASLLITTEALVAELPKEEKTAPAPAMDY
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggctgccaaggaagtgaaatttgcgtcggacgcgcgtgaccgcatgctgcgcggcgtg
gatacgctggcgaacgccgtgaaggtgacgcttggtccgaaaggccgcaatgtcgttatc
gagaagtcgttcggggcgcctcgcatcaccaaggacggcgtcaccgtcgccaaggaaatc
gaactcgccgacaagttcgagaatatgggcgcgcagatgctgcgcgaggtcgccaataag
cagaacgacaaggccggcgacggcacgaccacggcaaccgtgctggcccaggcaatcgtg
cgcgagggcgcgaaggcggttgccgccggaatgaatccgatggatctcaagcgcggcatc
gaccttgcggtcggcgccgtcgtcgaggatctcaagagccatgccaagaaggtcggcgcc
aacagcgagatcgcacaggtcgcgaccatctcggccaacggcgacgcggaggtcggacgc
atccttgccgaagcgatggaaaaggtcgggaacgagggcgtgatcacggtcgaggaggcg
aagagcctcgagaccgagctggagacggtcgaaggcatgcagttcgaccgcggctatctg
tcgccctatttcatcaccaatgccgagaagctcaaggtcgagctggacgatccttatatc
ctcatccacgagaagaagctttcaaacctgcaggcgctggtgccgctgctcgagaaggtc
gtccagtccggccgaccgctgctcatcatcgccgaggatgtcgaaggcgaggcgctcgct
acgctggtcgtcaacaagctgcgcggcgggctcaagatcgcggcggtcaaggcgccgggc
ttcggcgatcgccgcaaggcgatgctcgaggatatcgcgatcctgaccggcggcaatgtc
gtctccgaggatcttggcatcaagctggagaatgtcaccgtcgacatgcttggccgcgcc
aagaaggtcacgatcgacaaggacaatacgacgatcatcgatggcgtgggtcaaaagacc
gatatcgacggccgcgttgcgcagctgcgccagcagatcgagaccaccacgtccgactat
gaccgcgagaagctgcaggagcgcgtggcgaagctcgccggcggcgtcgcggtgatccgg
gtcgggggcgcaaccgaggtcgaggtcaaggagaagaaggaccgcgtcgacgacgcgctc
catgcgacgcgcgccgctgtcgaggaaggcatcctgccgggtggcggtatcgcgctgctc
cgcgcgatcaaggcgctcgacggtctcaaggccgccaatgacgaccagcagtccggcatc
gacatcatccgccgggcgctccgcgcgcctgcgcggcagatcgccgaaaatgccggcgag
gatggggcctatatcgtcggaaagctgctcgaaagctccgagtacaactggggcttcaat
gccgccaccgccgaatatcaggatctcgtccaggcgggcgtgatcgatccggccaaggtg
gtgcgtaccgcccttcaggatgccgcctcggtcgcctcgctgctcatcacgacggaggcg
ctcgttgccgagctgccgaaggaggagaagaccgcgccagcgccggcgatggattattga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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