KEGG   Sphingobium sp. YBL2: TZ53_02040
Entry
TZ53_02040        CDS       T03855                                 
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
syb  Sphingobium sp. YBL2
Pathway
syb02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:syb00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TZ53_02040
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:syb02044]
    TZ53_02040
Secretion system [BR:syb02044]
 Type IV secretion system
  Trb secretion system protein
   TZ53_02040
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: AJR22738
UniProt: A0A0C5XPG2
Position
complement(414887..415660)
AA seq 257 aa
MIFRRAVQRYGQTPAPETPYQRAGQLWDERIGSARVQARNWRLMAFGTLALSSAMASGLI
WQSLQSRVVPYVVEVDRLGEARAVSQAEADYQPTDPQIAYQLARFIENVRGVSLDPVLMR
RNWLQAYDFASERGAIFLGEYARARQPFSRIGEQTASVQVTSVLRASNRSFQVKWTESEY
ERGSQAGSSRWTAILTIVTKVPRTADDLRRNPLGIYVDAIDWSREIEGDATQLRSAPSRT
AAVTAISKPSDRMEAQP
NT seq 774 nt   +upstreamnt  +downstreamnt
atgatctttcgacgagcagtccagcgttatggccagactcccgcgccggaaacgccgtat
cagcgagcgggccagctctgggacgagcggatcggaagcgcgcgcgtgcaggcgcggaac
tggcgattgatggctttcggtacgttggccttgtcgagcgcgatggcatcaggcctgatc
tggcaatcgctgcaaagccgcgttgtgccctatgtcgtagaggtggatcgactgggtgag
gcgagggcggtgtcgcaggccgaggcggattatcagccgaccgatccgcaaatcgcctat
cagctggcgcgcttcatagagaatgtacgcggcgtgtcgctcgatcctgtgctgatgcgc
cggaactggttgcaggcttatgattttgccagcgaacggggcgccattttcctgggggaa
tatgcgcgggcgcggcaacccttctcccggatcggcgaacagacggcttcggtgcaggtg
acgagcgtcctgcgcgcgtcgaacagatcctttcaggtgaaatggaccgagagcgaatat
gagcggggaagccaggcgggctcgtcgcgctggacggcgatattgaccatcgtcaccaag
gttccgcgaaccgccgatgatctccgccgtaatccgctcggcatctatgtcgatgcgatt
gactggagccgggagatcgagggcgacgccacccagctacgatcggccccgtcccggaca
gcggcggtaacagccatttccaagccatcggacaggatggaggcgcagccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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