KEGG   Sphingobium sp. YBL2: TZ53_02080
Entry
TZ53_02080        CDS       T03855                                 
Name
(GenBank) conjugal transfer protein TraG
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
syb  Sphingobium sp. YBL2
Pathway
syb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:syb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    TZ53_02080
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:syb02044]
    TZ53_02080
Enzymes [BR:syb01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     TZ53_02080
Secretion system [BR:syb02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   TZ53_02080
SSDB
Motif
Pfam: T4SS-DNA_transf TrwB_AAD_bind TraG-D_C
Other DBs
NCBI-ProteinID: AJR22745
UniProt: A0A0C5XEM8
Position
complement(422312..424333)
AA seq 673 aa
MTPTKLLIGQILIVLVIVLAGLWAATQWAAVMLAYQPQLGPSWFMLGDIPIYRPWSLFAW
WYHFDAYAPIVFDKAGALAAASGFVGCASAIFGSLWRARQSRQVTTYGSARWASHRDVRR
AGLYRPAGVMLGRHGDHYLRHEGPEHVMAFAPTRSGKGVGLVVPTLLSWTGSAVIHDIKG
ENWTLTAGWRARFSHCLLFNPTDARSARYNPLLEVRRGSDEVRDVQNIADILVDPEGALT
TRNHWEKTSHSLLVGAILHILYAEEEKTLAHVATFLSDPRRSFAATLHLMMTANHLGTKE
HPQVHPVVASAARELLNKSENERSGVLSTAMSFLGLYRDPTVAQVMSRCDWRIADLMEGT
QPCSLYLVVPPSDISRTKPLIRLILNQIGRRLTERLDQSAGKDQRHQLLMMLDEFPALGR
LDFFETSLAFMAGYGIRAFLIAQSLNQIEKAYGEHNAILDNCHVRIAFATNDDRTAKRIS
DALGTATEQRAMRNYAGHRLAPWLAHVMVSRQETARQLLTPGEVMQLSTEEELVLVAGMA
PIRAKKLRYYSDPNFAARIGAPPLLSDKAYSDIPPSRQDDWSAPAERGGTLAAAAVTGKA
ADEGGREQHRHPAFETEIRTGRQNSELEMDRSIIEDEDVVSDKRAMEQAQRMAPVIRGHA
IDVASTHEKALGL
NT seq 2022 nt   +upstreamnt  +downstreamnt
gtgaccccgaccaaattgctgatcggccagattctcattgtgctggtcatcgtgcttgca
ggcctatgggcagccacccaatgggcggcggtgatgctcgcctatcaaccccagctgggg
ccctcctggttcatgctcggcgatattccgatctatcgcccctggtcgcttttcgcctgg
tggtatcatttcgacgcttatgcgccgatcgtcttcgacaaggcaggcgcgctggccgcg
gccagcgggttcgtcggctgcgcatccgccatcttcggttcgctatggcgcgcgcgccag
tcccggcaggtgacgacctacggctcggcgcgctgggcgagccacagggatgtgcggcgg
gcgggactgtatcggccggccggtgtcatgctcggccgccatggcgaccattatctgcgt
catgaggggcctgagcatgtcatggcctttgcgcccacgcgttcgggcaagggcgttggc
ctggtcgtgccgaccctgttgtcctggaccgggtccgcggtcattcacgacatcaagggg
gagaactggaccctgacggcaggctggcgcgcccgtttctcgcattgcctgctgttcaat
ccaacagatgcacgctctgcccgctacaatcccctgcttgaggttcgccgcggctcggac
gaggtccgggacgtccagaatatcgccgatatcctcgtcgatcccgagggcgcgctgaca
acccggaaccactgggaaaagaccagccattccctgctggtcggcgccattctccatatt
ctctatgccgaggaggaaaagacgctcgcccatgtggcgacctttctttccgatccccgc
cgaagctttgcggcaacgctccatctcatgatgaccgccaaccatctcgggaccaaggag
catccgcaggtccatcctgtcgtcgcctccgccgcccgggaattgctgaacaagagcgag
aatgaacgatcgggcgtgctttcgaccgccatgtccttccttggcctctatcgcgatccc
actgtcgcgcaagtgatgtcgcgctgcgactggcggatcgccgatctcatggagggcacg
cagccctgttcgctttatctggtggtgccgccgtccgacatcagccgtaccaagccgctg
atccggctgatcctcaaccagatcggacggcggctgaccgagcgcctcgatcagtcggcc
gggaaagatcaacggcaccaactcctcatgatgctggatgagttccccgcgcttggccgg
ctggatttcttcgaaacgagccttgccttcatggccggttacgggatccgggccttcctg
atcgcgcagagccttaaccagatcgaaaaggcctatggcgagcacaatgccattctcgat
aattgccacgtccgtatcgcctttgcgaccaatgacgatcggacggcgaagcgtatatcc
gatgcgctggggacggcgaccgaacaacgcgccatgcgcaactatgcggggcaccgtctg
gcgccgtggctggcccatgtcatggtcagccgccaggaaaccgcgcgccagcttctgaca
cccggcgaagtcatgcagctttcgaccgaggaggaactggtcctcgtcgccggcatggcg
ccgatccgcgcgaagaagctgcgctattatagcgatcccaatttcgccgctcgtatcgga
gcgccgccgctgctgagcgacaaggcctattccgacattcccccgtcgcggcaagatgat
tggagtgcgcctgccgagcggggaggcacattggctgccgcagctgtcacggggaaggcg
gccgacgaaggcgggcgcgagcagcatcggcatccggcgtttgaaaccgagattcggacc
ggcaggcagaattccgaattggagatggatcgctccatcatcgaggatgaggatgtcgtt
tccgacaagcgcgcgatggagcaggcgcagcgcatggcgccggtcatccgcggccatgcc
atcgatgtcgcgtcaacccatgaaaaggcgttggggctatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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