KEGG   Synechococcus sp. CC9605: Syncc9605_2197
Entry
Syncc9605_2197    CDS       T00292                                 
Name
(GenBank) allophycocyanin alpha chain
  KO
K02092  allophycocyanin alpha subunit
Organism
syd  Synechococcus sp. CC9605
Pathway
syd00196  Photosynthesis - antenna proteins
syd01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:syd00001]
 09100 Metabolism
  09102 Energy metabolism
   00196 Photosynthesis - antenna proteins
    Syncc9605_2197
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:syd00194]
    Syncc9605_2197
Photosynthesis proteins [BR:syd00194]
 Antenna proteins
  Phycobilisome - Cyanobacteria, Red alga [OT]
   Allophycocyanin (AP)
    Syncc9605_2197
SSDB
Motif
Pfam: Phycobilisome DUF4165
Other DBs
NCBI-ProteinID: ABB35936
CyanoBase: Syncc9605_2197
Position
2012265..2012750
AA seq 161 aa
MSIVSNSIINADAEARYLSPGELDQIKAFVTGGQRRLRVAQVLCESRERIVKQAGGQLFQ
KRPDVISPGGNAYGEEMTATCLRDMDYYLRLVTYGIVAGDVTPIEEIGVIGAKELYRSLG
TPLEALAESVREMKIVAMGLLTGADAEEAGTYFDYVVGSLA
NT seq 486 nt   +upstreamnt  +downstreamnt
atgagcatcgtctccaactcgatcatcaacgcggacgccgaagcccgctacctcagccct
ggcgaactcgaccagatcaaagccttcgtcaccggcggtcaacgccgtctgcgcgtggcc
caggtcctgtgcgagagccgcgagcgcatcgtcaagcaggctggtggtcagcttttccag
aagcgtcccgatgtcatctcccccggcggcaacgcctacggcgaagagatgaccgccaca
tgtctgcgtgacatggattattacctccgcctcgtcacctacggcatcgttgccggtgac
gtgaccccgatcgaagagatcggtgtgattggcgccaaagagctctaccgctccctgggc
acacccctggaagcattggctgaatccgtgcgcgaaatgaaaattgtcgccatgggcctc
ctcaccggagccgacgcagaggaagccggcacctacttcgactacgtggttggctccctc
gcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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