KEGG   Synechococcus sp. CC9311: sync_2548
Entry
sync_2548         CDS       T00390                                 
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG, TIGR01125
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
syg  Synechococcus sp. CC9311
Brite
KEGG Orthology (KO) [BR:syg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:syg03009]
    sync_2548
Enzymes [BR:syg01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     sync_2548
Ribosome biogenesis [BR:syg03009]
 Prokaryotic type
  ribosomal protein modification factors
   sync_2548
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM_2 TRAM
Other DBs
NCBI-ProteinID: ABI47503
CyanoBase: sync_2548
UniProt: Q0I735
Position
2234624..2236036
AA seq 470 aa
MQGHAMAVDAKTGNSLSERPTVAFAHLGCEKNRVDTEHMLGLLAEAGYGVSSDENDANLV
VVNTCSFIQDAREESVRTLVGLAEQGKELIIAGCLAQHFQDELLESIPEAKAIVGTGDYQ
HIVEVLQQVEAGERVNRVSQTPTFVADENLPRYRTTGEAVAYLKVAEGCDYRCAFCIIPH
LRGNQRSRTIESIVAEAHQLAEQGVQELILISQITTNYGLDLYGKPRLADLLKALGDVEI
PWIRVHYAYPTGLTPAVLAAYRDVPNVLPYLDLPLQHSHPEVLRAMNRPWQADVNERLLD
QIREQLPNAILRTTLIVGFPGETEDQFEHLAGFLERQRFDHVGIFTFSPEDGTAAATLPD
SVPDEIAIARKDKLMTLQQPISAARNASWIGKTVDVLVEQHNPSTGEMIGRCSRFAPEVD
GEVLVQPGDNGLQVNPGTMVPVQITGADIYDLSGHVVSAAHMVAAARAAT
NT seq 1413 nt   +upstreamnt  +downstreamnt
ttgcagggtcatgccatggccgtggacgccaaaacaggcaacagcctctcggaacggcca
acagtggccttcgcccatctgggctgcgaaaaaaatcgcgtggatacagagcacatgctc
ggacttctcgcggaagccggctatggggtgagcagcgatgaaaacgatgccaaccttgtg
gtggtgaacacctgcagcttcattcaagacgcccgcgaagaatcagtaagaaccctcgtg
ggacttgcagagcaaggcaaggagctgatcattgctggatgcctggcccagcattttcag
gacgagcttctggagtcgataccagaggcaaaagcgatcgtgggcaccggcgactatcaa
cacatcgtggaggtgctgcagcaggtagaagcgggcgaacgagtgaatcgtgtgagtcaa
acgccaacctttgtggccgacgaaaacctgccccgctaccgcaccacaggtgaagccgtt
gcctatttaaaagttgctgaaggctgcgactaccgctgcgcgttttgcatcattccccat
ctccgcggaaatcaacgctcaagaacgatcgaatcgatcgtggctgaagcccatcagttg
gcagaacaaggggttcaggaattgatcctgatcagccagatcaccaccaattacggccta
gacctctatggcaagccccgtctcgccgatctccttaaggcactcggcgacgtggaaatc
ccctggattcgcgtgcactacgcctaccccacgggacttacccctgccgttcttgcggcc
taccgagatgttcccaatgtgctgccctatctcgatttaccgcttcagcacagccatcct
gaggttttgcgagccatgaatcggccatggcaagcggatgtcaatgagcgattgctcgat
cagattcgtgaacaactaccgaatgcgatccttcgcaccacattgattgtgggattcccc
ggcgaaacagaggatcaattcgaacatctggccggtttcttagaacgtcaacgctttgat
cacgttgggattttcaccttctcaccagaagatggcacggctgcagcaactctccctgat
tcagtgccagacgagattgccatcgcgcgcaaggacaagttgatgactttgcaacagccc
atttccgcggctcgcaatgcctcctggattggcaaaaccgtggatgtcttagttgagcaa
cacaatccctccaccggagaaatgattggccgatgctcccgattcgcgccagaagtggac
ggagaagtgctggtgcaacccggggacaacggactgcaagtgaatccgggaaccatggtg
cccgttcagatcacaggagcagacatctacgacctctccgggcatgtggtcagtgctgct
cacatggtcgccgccgctcgcgctgcgacgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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