KEGG   Synechococcus sp. WH 8109: Syncc8109_2510
Entry
Syncc8109_2510    CDS       T03783                                 
Symbol
ndhD1
Name
(GenBank) proton-translocating NADH-quinone oxidoreductase, chain M
  KO
K05575  NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
Organism
syh  Synechococcus sp. WH 8109
Pathway
syh00190  Oxidative phosphorylation
syh01100  Metabolic pathways
Module
syh_M00145  NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria
Brite
KEGG Orthology (KO) [BR:syh00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    Syncc8109_2510 (ndhD1)
Enzymes [BR:syh01000]
 7. Translocases
  7.1  Catalysing the translocation of protons
   7.1.1  Linked to oxidoreductase reactions
    7.1.1.2  NADH:ubiquinone reductase (H+-translocating)
     Syncc8109_2510 (ndhD1)
SSDB
Motif
Pfam: Proton_antipo_M DUF3098 DUF5531
Other DBs
NCBI-ProteinID: AHF64817
UniProt: W0GX30
Position
1888417..1890054
AA seq 545 aa
MFEFAVAGVSEPVQATVPWLSLSILVPIVGALLVPLVPDKGEGKQVRWYALIVTLITFLI
TVAAYLTGYDPSLSGLQLSERVSWLPDLGLTWAVGADGLSMPLILLTSFITSLACLAAWP
VSFKPRLFYFLLLAMDGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAATK
FILYTAGSSLFILLAALAMGFVGGGTPSFEYTALAAKDFGTGFQLLCYAGLLIAFGVKLP
IVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNCELLPAAHSQFAPLLIVLGVV
NIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGVGSFSALGTSGAMLQMISHGLIGASLF
FLVGATYDRTHTLQLDEMGGIGQKMRIMFALWTVCALASLALPGMSGFVSELMVFAGFAT
DEAYTLPFRVVICGLAAVGVILTPIYLLSMLREIFFGKEKEELVSHTNLVDAEPREVYII
GCLLVPIIGIGLYPKLMTDSYRSSIEALVSRNLGAMEQVISPTAPLIRGQAPVPAIIQAP
AVGAS
NT seq 1638 nt   +upstreamnt  +downstreamnt
gtgttcgaattcgcagtcgccggggtgagtgagccggtgcaggccaccgttccatggctg
agcctgtcgatcctggtgccgattgtgggtgccctgctggttccgctagttccagacaaa
ggcgaaggcaagcaggtgcgctggtacgccctgatcgtgacgctgatcaccttcctgatc
accgtcgcggcctacctcaccggctacgacccgagcctgagtggcttgcagttgtccgaa
cgggtgagctggctgccagatcttggcctcacctgggcggtgggagccgacggcctctcg
atgccgttgatcctgctcaccagcttcattacaagcctggcctgcctggcggcatggccg
gtgagtttcaaacctcggctgttttatttcctgctgctggccatggacggcggccagatc
gcggtgttcgccgtgcaggacatgctgctgttcttcctggcctgggagctggaactgatc
ccggtgtatctgttgttggccatctggggcggcaagaaacgccagtacgccgcaaccaaa
ttcatcctctacacagccggcagctcgttgttcatcctgttggccgccctggccatgggc
ttcgtcggcggcggcacacccagttttgagtacaccgctcttgcggccaaagacttcgga
acgggctttcaactgctctgctatgccgggctgctgatcgccttcggcgtgaagctgccc
atcgtgcccctgcacacctggctgccggatgcccatggcgaagcaacggcaccggtgcac
atgctgttggcaggcatcctgctgaagatgggcgggtatgcactgctgcgcttcaactgt
gaactgctgccagcggcacactcccagttcgccccactgctgatcgtgctgggggtggtg
aacatcatctacgccgccctcacctccttcgcccagcgcaacctcaagcgaaagatcgcc
tacagctcgatcagccacatgggcttcgtgctgatcggcgtgggcagcttcagtgccctg
ggcaccagtggcgccatgctgcagatgatcagccacggcttgatcggtgccagcctgttc
ttcctcgtgggtgccacctacgaccgcacccacacgcttcagctggatgagatgggaggc
attggccagaagatgcgaatcatgttcgcgctctggacggtgtgtgccctcgcctccctg
gccctacccggcatgagcggattcgtgagcgaactgatggtttttgccggtttcgccacg
gatgaggcctacaccctgcccttccgagtggtgatctgcgggctggccgccgtcggcgtg
atcctcacaccgatctatctgctctcgatgcttcgcgagatcttcttcggcaaggagaaa
gaggagttggtgtcccacaccaacctggtggatgcggagccgcgcgaggtgtacatcatc
ggctgcctgctggtgccgatcatcggaatcgggctgtaccccaagctgatgaccgacagc
taccgcagctcgatcgaagcactggtgagccgaaacctgggtgcgatggaacaggtgatc
tcgccaacggcccccttgattcgaggtcaggcccccgttccagcgatcatccaggccccc
gccgtgggcgcgtcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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