KEGG   Sediminicola sp. YIK13: SB49_03230
Entry
SB49_03230        CDS       T04145                                 
Name
(GenBank) membrane protein
  KO
K18139  outer membrane protein, multidrug efflux system
Organism
syi  Sediminicola sp. YIK13
Pathway
syi01501  beta-Lactam resistance
syi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:syi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SB49_03230
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    SB49_03230
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:syi02000]
    SB49_03230
   01504 Antimicrobial resistance genes [BR:syi01504]
    SB49_03230
Transporters [BR:syi02000]
 Other transporters
  Pores ion channels [TC:1]
   SB49_03230
Antimicrobial resistance genes [BR:syi01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    SB49_03230
   Multidrug resistance, efflux pump MexJK-OprM [MD:M00642]
    SB49_03230
   Multidrug resistance, efflux pump MexXY-OprM [MD:M00643]
    SB49_03230
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: ALM06922
UniProt: A0A0S1S2I2
Position
complement(718060..719463)
AA seq 467 aa
MKSSRILKYLCLATVPLLLVSCFAAKEYVRPQETVVTADYFRTDNLSKDSSSLATISWKE
LFTDPVLQAYIEEGLTNNIDIRIAIQQILISEAYVKQGKSGYYPTLSGTAQYSHLELSNN
SQFGAQFNKLDIYQLSGGLSWEADIWGKIRSNKRAFQASYLQTVAAHKAVKSRLVANIAS
TYYQLLALDEQIRITQETITNREKGLETTLALKDAGNVTEVGVKQTEAQLYSAQGLLIDL
RNNARLLENNLSILLGSDSRAILRGSLQNQTITTPLTTGVPAQLLANRPDVMSAEYRLIN
AFELTNVARSNFYPSLTLSGNGGLQSLDFDKLFSSSSLFATVIGGLTQPIFNGRSIRTQY
EVSQAQQEQAKLAFKFSVLNAGKEVSDALYSYNAATEKITIKEKEFNAYDLATGYSEELL
DNGLANYLEVLRARENALNSSLDLVNSKNNQLQAVVDLYEALGGGWQ
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgaaatcatcacgaatattaaaatatctatgtctcgccactgtgcccttgctgctcgtt
tcctgctttgcggcaaaggagtatgtgcggccccaggaaacggtagtcacagcagattat
ttccgaaccgataatttgtcaaaggatagttcttccttggcaacaatttcctggaaggaa
ttattcacggatcccgttttacaggcatatattgaagagggactgaccaacaacatcgat
atccgtattgccattcagcaaatattgatttctgaagcctatgtaaaacaaggaaagtcg
ggctactaccctaccctaagtggtacggcccaatattcccacttagagctttccaataat
agccaatttggggcacagtttaataaattggacatatatcagcttagtggaggtctttcc
tgggaagccgatatctggggcaagatacgaagcaacaagcgcgcatttcaagcctcttat
ctacagactgtggccgcacataaagcggtaaaaagccgattggtggccaatatagcttca
acttattaccaactgttggcgttggatgaacaaatacgtatcacccaagagaccattact
aacagggaaaaaggcttggaaaccaccctggctttaaaagatgcaggaaatgttaccgaa
gttggtgtaaaacaaactgaagcccaattatacagcgcacaaggccttttgatcgattta
cgaaacaatgcccgacttctggaaaacaacttgtccatcttgctaggaagtgattccagg
gccatcttaaggggttctttacaaaaccaaacgataaccactcccttgactacaggagta
cctgcacaattattggcgaaccgtccggatgtgatgtcggcagaatatagattgatcaat
gcctttgaattgaccaatgtggccagaagcaatttctatccttcgttgaccttgtcaggc
aatggcgggctacagagtttggattttgataagttattcagttcaagttcactttttgcc
actgtcattggtggtcttacccagcccattttcaatggacgtagtataagaacacaatac
gaggtgtcgcaagcacagcaagagcaggcaaaactagcttttaagttttcggtgctcaat
gctggaaaagaagtttcagatgccctatattcctataatgcggcaacagaaaagataacg
ataaaggaaaaagaattcaacgcttatgatttggcaacaggctattcggaggaattgttg
gacaatggacttgccaattatcttgaagtgttgagagctagggaaaatgccctcaactcc
agtctcgatttggtaaactcaaagaacaatcagttacaggccgttgtagacttgtacgaa
gctcttggtggtgggtggcaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (2)   
   KEGG MODULE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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