KEGG   Sediminicola sp. YIK13: SB49_04615
Entry
SB49_04615        CDS       T04145                                 
Name
(GenBank) DNA topoisomerase IV subunit A
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
syi  Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:syi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:syi03032]
    SB49_04615
   03036 Chromosome and associated proteins [BR:syi03036]
    SB49_04615
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:syi02048]
    SB49_04615
Enzymes [BR:syi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SB49_04615
DNA replication proteins [BR:syi03032]
 Prokaryotic type
  DNA Topoisomerases
   SB49_04615
Chromosome and associated proteins [BR:syi03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    SB49_04615
Prokaryotic defense system [BR:syi02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    SB49_04615
SSDB
Motif
Pfam: DNA_topoisoIV
Other DBs
NCBI-ProteinID: ALM07162
UniProt: A0A0S1S368
Position
complement(1036201..1038849)
AA seq 882 aa
MEENEEVNEGINESLDNTQDSLTKVTGMYKDWFLDYASYVILERAVPAIEDGFKPVQRRI
MHALKELDDGRYNKVANVVGHTMQYHPHGDASIADAMVQIGQKDLLIDTQGNWGNILTGD
GAAASRYIEARLSKFGLEVVFSPKITEWQQSYDGRRKEPVNLPVKFPLLLASGAEGIAVG
LSTKVLPHNFIELIDASIKHLKGQRFTLFPDFPTAGIIDVTNYNEGLRGGKIRVRAKISQ
LDRNTLVINEIPYGTNTSSLIDSILKANDKGKIKIKKIEDNTAADVEILVHLPSGLSPDK
TIDALYAFTACESSISPLGCIIEDNKPLFIGVVEMLKRSTDNTVDLLKAELEIQLAELEE
QWHFTSLERIFIEKRIYRDIEEEETWEGVIKAIDKGLQPHVGHLKRAITEEDIVRLTEIR
IKRISKFDLEKAQQFIEGLEEKIALVKHHLEHLIEYAIDYFKSLKEKYGKGRERKSEIRI
FDDIEATKVVIRNTKLYVNKEEGFVGTSLKRDEYVTDCSDIDDIICFTKDGKMMITKVDA
KTFIGKNIIHVAVFKKKDKRTIYNMIYKDGKGGPSYIKRFNVTSITRDKIYDLTNGKANS
ELLYFTANPNGEAEVVTVLLRQAGSIKKIKWDIDFADVLIKGRASKGNVVTKYPVKRVEL
KEKGVSTLKPRKIWFDDVVRRLNVDGRGDLLGEFRGDDMLLVVTQKGIAKTLIPDLSTHF
DEDMILLEKWNPEKPLSAVYYEGEKEKYYIKRFVIESEGKEELFISEHPKSVLELISTDW
RPVVEIEFTKPRGKDAKPNQTIDLENFIAIKGIKALGNVLTSEKVKSVNALEPLPFEEPE
EQKPEDMEVVDEEPLDSGSGDTSNSTKPKGSNPEDEGQTLLF
NT seq 2649 nt   +upstreamnt  +downstreamnt
atggaagagaatgaagaagtaaatgagggaattaatgaaagcctagataacacccaggac
tccttgaccaaggtcacagggatgtacaaagattggtttttagattacgcttcctatgtt
attttagaacgtgccgtgccagctatcgaagacggatttaaacccgtgcagagaaggatt
atgcacgctctaaaggaacttgatgatggtagatacaacaaggtggcaaacgttgttggg
cataccatgcagtaccatccccacggagatgccagtatagctgatgccatggtgcagatc
ggacaaaaggatctgctgatcgatacccagggtaactggggtaatattttgactggagat
ggggcagcggcatcgagatatattgaggccaggctttccaaatttggactggaagttgtt
tttagtccaaaaattacagaatggcagcaatcctatgacggcaggaggaaagagcctgta
aaccttccggttaaattcccgcttttattggcctcgggtgccgaaggaattgcggtggga
ctttccacaaaagtactcccacacaattttattgaattgatagacgcctcaatcaaacat
ttaaaagggcagcgttttaccctctttccggattttccgactgcagggattattgatgtg
accaattataacgaaggactcaggggagggaaaattcgcgtcagggcaaaaatttcacaa
ctggacaggaatacactggttattaacgaaattccatacggaaccaatacctccagttta
atagattccatcctaaaagcaaatgataaaggcaaaataaaaattaaaaaaattgaggat
aacactgccgcggatgtagagattttggtgcatttgccaagtggactttctcctgataag
accattgacgccctttatgcatttaccgcctgtgaatcatcaatttcaccgttgggttgc
attatagaagacaacaaacctctttttattggagtggttgaaatgttgaaaaggtccact
gataatacggtagatctattaaaggcggaattggaaatacagcttgccgaacttgaggag
cagtggcactttacttctttggagcgcatttttattgagaaaagaatatatagggatatc
gaagaggaggagacctgggagggggttatcaaggccattgataagggattacagcctcat
gtcggccatctaaaaagagctataactgaggaagatattgtccgacttacagaaattcgg
atcaaaaggatttctaagttcgacttggaaaaggcccaacaatttattgaaggtctggaa
gagaaaatcgcactggtaaaacatcaccttgagcatttgattgaatatgccattgattat
ttcaaaagtctaaaggaaaaatacggaaaaggaagggaacgtaaatctgaaataagaatt
tttgatgatatagaagctaccaaggtagttattcgaaatacaaaactctatgtgaacaaa
gaagaaggttttgtgggaacttctctaaaaagggacgaatatgtgaccgattgcagtgat
attgatgatatcatttgttttacgaaagatggcaaaatgatgatcaccaaggtggacgcc
aagacttttataggtaaaaatattattcatgtagcggtttttaagaaaaaggataagcgt
accatttataatatgatctataaggacgggaagggtggtcccagttatataaaacgattt
aatgtcaccagtatcaccagggataagatttatgacctgaccaatggtaaggccaattcg
gaactattgtactttaccgccaatcctaatggggaggccgaagtggttactgtattgttg
aggcaggctggcagtataaaaaaaataaaatgggatatcgattttgccgatgtacttata
aaaggcagggcttctaaagggaatgttgtcacgaaataccctgtgaaacgtgtggaatta
aaagaaaagggtgtttctaccctgaagccaagaaaaatctggttcgacgatgtggtcaga
aggctcaatgtagatggaaggggagacctgttaggggaatttaggggagatgacatgctt
cttgttgtaacccaaaaaggaattgcaaaaactttgatacctgatctttccacgcatttt
gatgaagacatgattttattggaaaaatggaatcctgaaaagccattatccgctgtctat
tatgaaggggaaaaggagaagtattatattaaacgctttgtcatagaaagtgaaggcaaa
gaggaattgttcatttctgaacaccctaagtcggtcttagaactcatttccacagactgg
agacctgttgtagaaatagaattcaccaaacctagaggcaaagacgcaaaacctaaccaa
acaattgatttggaaaattttatagctattaagggaataaaagctttaggtaatgtgcta
acatcggaaaaggtgaagagtgtaaacgcattggaaccattaccatttgaagagccagag
gagcaaaagccagaggatatggaagttgttgatgaagagcccttagattctggaagtggt
gatacttcaaactccacgaagcccaagggatctaacccagaagatgagggccagacttta
ttattctaa

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (31)   

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