KEGG   Sediminicola sp. YIK13: SB49_05425
Entry
SB49_05425        CDS       T04145                                 
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
syi  Sediminicola sp. YIK13
Pathway
syi00740  Riboflavin metabolism
syi01100  Metabolic pathways
syi01110  Biosynthesis of secondary metabolites
syi01240  Biosynthesis of cofactors
syi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:syi00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SB49_05425
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SB49_05425
Enzymes [BR:syi01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SB49_05425
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SB49_05425
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD APOBEC3
Other DBs
NCBI-ProteinID: ALM07302
UniProt: A0A0S1SA94
Position
1217968..1219020
AA seq 350 aa
MKIHEKYILRCIQVAKNGLGFTFPNPMVGSVIVHENKVIGEGFTSPYGGPHAEVNAINSV
KNKALLSKATLYVTLEPCSHFGKTPPCANLIIEHKIPKVVIGLLDPHVKVAGNGIKKLKE
AGCEVLVTVLEKECRDHHKRFLTFHEQKRPFIILKWAETLDGFIAPEQSLRETDPSPYWI
TSLQSRQLVHKWRSEEQAILVGTNTILKDNPKLNVRLWTGKSPTRILIDRNLKVGNDFHV
MDGSVKTIVITQIELSKKYVSSVDYEVIDFSKNVAQQICEVLYKHNILSVIIEGGSKTLQ
TFLDANLWDEARVFKGTNYFTKGLKAPLLNKSIVSKRTIITDTLTIFSNV
NT seq 1053 nt   +upstreamnt  +downstreamnt
gtgaagatacatgaaaaatatattttgcgatgtatccaagtagctaaaaatggacttgga
tttacctttcccaatccaatggtaggaagtgtcatagtccatgaaaacaaggttattgga
gaaggttttacgagcccatatggcgggccacatgccgaagtaaatgctattaattcggtt
aagaacaaagccttactttccaaggccacgctttacgtcaccctagaaccttgctcccac
tttggaaaaacccctccttgtgccaatctcatcatagaacacaaaataccaaaggtggtc
atcgggctgttagacccccatgttaaggtggcaggcaatggcatcaaaaaattgaaagag
gcaggatgtgaggtactggttactgtgctggaaaaggaatgtagggatcatcacaagcgt
tttttgacctttcatgaacaaaaaaggccttttatcattctaaaatgggcggaaactctc
gatggctttatcgcccctgaacaatctttacgggaaacggacccatcaccatattggatc
accagtttacagtccagacagttggttcataagtggcgtagtgaagaacaggccatttta
gtgggtaccaataccatcctgaaagacaacccaaaactgaatgtaaggctatggaccgga
aaatccccgacgcgaatactaattgatagaaacttaaaggtgggaaacgatttccatgtg
atggatggtagtgtaaagaccatcgtaattacacagatagaactcagtaaaaaatatgtg
tctagtgtagattacgaggtgatcgatttttcaaaaaatgtagcacagcaaatttgcgag
gtactctacaagcacaacatcttaagtgtaattatcgaaggaggttccaaaacactacaa
acgttccttgatgcaaatctctgggatgaagcgagggtatttaaagggaccaactatttc
accaaaggcctaaaagcacctctgttaaacaaatctattgtaagcaaacgaacaattatc
acagacactttaaccatcttcagcaatgtttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (45)   

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