KEGG   Sediminicola sp. YIK13: SB49_05480
Entry
SB49_05480        CDS       T04145                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
syi  Sediminicola sp. YIK13
Pathway
syi00300  Lysine biosynthesis
syi00470  D-Amino acid metabolism
syi01100  Metabolic pathways
syi01110  Biosynthesis of secondary metabolites
syi01120  Microbial metabolism in diverse environments
syi01230  Biosynthesis of amino acids
Module
syi_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:syi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SB49_05480
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SB49_05480
Enzymes [BR:syi01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     SB49_05480
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: ALM07313
UniProt: A0A0S1S9W0
Position
complement(1226739..1227515)
AA seq 258 aa
MNLTFYKYQGTGNDFVMIDNRDNVFPKSNTQLVAKLCDRKFGIGADGLILLENDKGTDFK
MVYYNSDGNTSTMCGNGGRCLVAFAKYLGVITDKATFMAVDGLHHATIEGEVVSLQMQDV
NEVQEHKDFLFLDTGSPHHVQIVEDVLKVDVPVEGAKLRYGRYGDNGSNINFVTSEGGDT
FKVRTYERGVEDETLSCGTGVTAVALAMHKIGKVSGNKVAIKTQGGDLHVNFERGDSGYQ
DIHLIGPAKYVFKGEIVC
NT seq 777 nt   +upstreamnt  +downstreamnt
atgaaccttacattttacaaatatcaaggaacgggcaatgactttgtcatgattgacaat
agggataatgtatttcctaaaagcaacacccaattggtggctaaactatgcgatcgaaaa
tttgggataggtgcagatggacttattctgttggaaaatgacaaagggaccgattttaag
atggtgtactataattctgatgggaataccagtaccatgtgtggaaatggaggcaggtgt
ttggtggcttttgccaaatacttgggagtcataactgacaaggctacatttatggctgta
gatgggttgcaccacgctaccatagagggagaagttgtgagccttcaaatgcaggacgtg
aacgaagtacaggagcataaagattttctgtttttagatacgggttccccccaccatgtg
cagatagtagaggacgtcctaaaggtagatgtgcctgtggaaggagcaaaattgagatat
ggacgctacggggataatggaagcaatataaattttgtaacatcggaaggtggggatacc
tttaaggtgcggacctatgaaaggggagtggaggatgaaaccttgtcctgtggaactggt
gttacggcagtagcattggctatgcacaaaattggtaaggtctctggaaataaagtggca
ataaaaacgcagggaggggacttacatgttaattttgagagaggagattctggctatcag
gatatccatttgataggaccggcaaaatatgtgtttaaaggagagatcgtatgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system