KEGG   Sediminicola sp. YIK13: SB49_06835
Entry
SB49_06835        CDS       T04145                                 
Name
(GenBank) ABC transporter
  KO
K06861  lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
Organism
syi  Sediminicola sp. YIK13
Pathway
syi02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:syi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    SB49_06835
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:syi02000]
    SB49_06835
Enzymes [BR:syi01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.5  ABC-type lipopolysaccharide transporter
     SB49_06835
Transporters [BR:syi02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipopolysaccharide transporter
    SB49_06835
 Other transporters
  Pores ion channels [TC:1]
   SB49_06835
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_23 DO-GTPase2 SbcC_Walker_B T2SSE AAA_30
Other DBs
NCBI-ProteinID: ALM07547
UniProt: A0A0S1SCH1
Position
1545833..1546573
AA seq 246 aa
MKLRAENIMKSYRGRKVVKGISLEVNQGEIVGLLGPNGAGKTTSFYMIVGLIKPNGGNIY
LDNMEITNFPMYKRAQNGIGYLAQEASVFRKLSIEKNILSVLQLTKLSKKEQLMKMESLI
EEFSLGHIRKNRGDLLSGGERRRTEIARALATDPKFILLDEPFAGVDPVAVEDIQRIVAQ
LKNKNIGILITDHNVQETLAITERSYLMFEGGILKSGIPEDLAADEMVRKVYLGQNFELR
KKKLDF
NT seq 741 nt   +upstreamnt  +downstreamnt
atgaaattaagggcagaaaatatcatgaagtcctacaggggacgaaaagtagtaaaaggc
atttccctggaggtgaaccaaggggaaattgttggacttctgggacctaatggggcaggg
aagacaacctccttttacatgattgttggccttataaaacccaatggggggaatatctat
ttggacaatatggaaataaccaattttccaatgtacaaaagggcccaaaacggtattggt
tacctagctcaagaagcttcggtatttagaaaactcagtattgaaaagaatattttaagt
gtattacagctcaccaaattgagcaaaaaagagcaacttatgaaaatggagtcgcttata
gaagagttcagtttagggcatattcgtaaaaaccgtggcgaccttttatcggggggtgaa
cgcagacgtacagaaattgcgagagccttggccaccgacccaaaatttattctcttggat
gaaccttttgcaggagtagatcctgtagccgtagaagacatccagcgtattgtagcccaa
ctcaaaaacaaaaatattggtattttgatcacggatcacaacgttcaagaaaccttggcc
ataacggagcgttcttatttaatgttcgaaggtgggatcttaaaatccggtattccggaa
gatttagcggccgatgaaatggtgcgtaaggtgtacttgggtcaaaattttgagctgcgt
aagaaaaagttggacttctag

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