KEGG   Sediminicola sp. YIK13: SB49_09585
Entry
SB49_09585        CDS       T04145                                 
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
syi  Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:syi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:syi03016]
    SB49_09585
Enzymes [BR:syi01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     SB49_09585
Transfer RNA biogenesis [BR:syi03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    SB49_09585
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TRAM_2
Other DBs
NCBI-ProteinID: ALM08022
UniProt: A0A0S1SC69
Position
2155088..2156533
AA seq 481 aa
MEKIIDESVQGTPLSVGKNQENKRKLYIESYGCAMNFSDSEIVASILANDGFNTTDILEE
ADLVLVNTCSIREKAELTVRKRLEKFNAVKKHRPQMKVGVLGCMAERLKTKLLEEEKIVD
MVVGPDAYKDLPNLIQEIDEGRNAVNVILSKEETYGDIAPVRLQSNGVSAFVSITRGCDN
MCTFCVVPFTRGRERSRDPQSILEEVNDLCAKGFKEVTLLGQNVDSYLWYGGGLKKDFEN
ASEMQKATAVNFSNLLDMVANAQPKLRIRFSTSNPQDMTLDVIHVMAKHRNICNYIHLPV
QSGSNRILKAMNRLHTREEYFELIDNIRQIIPECSISQDMIAGFPSETEEDHQDTLSLLE
KVKYDFGYMYAYSERPGTLAERKMEDDVPEPVKKRRLAEIIALQREHGHFRTKQHLGKVE
EVLIEGESKKSDSQWMGRNSQSTVVVFPKENYKVGDFVNVKINDCTSATLIGEAVGYSDN
N
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggagaagataatagacgaatcggttcaagggacacccctatccgtaggcaaaaaccaa
gaaaacaaacgcaagctttacatagaaagttatggctgtgccatgaacttttccgatagt
gaaattgtagcttccatcttggccaatgacgggttcaatacgaccgatatattggaggag
gccgatcttgttttggtgaacacttgttcgataagggaaaaagcagaacttaccgtccgc
aagcgattggaaaaattcaatgccgtaaaaaaacacagaccacagatgaaggtgggggta
ttgggctgtatggcagagcgtttgaaaaccaaattactggaagaagaaaaaatagtggat
atggtcgttgggccagatgcctataaggaccttcccaatttgatacaggagatcgatgaa
ggtagaaatgccgtaaacgtgatcctttccaaagaggagacctatggggatattgcccct
gtacgattgcaatccaacggggtttcggcctttgtttccattacccgtggttgcgataat
atgtgcacgttttgcgttgtcccttttaccagaggacgcgaacgcagtagggacccacag
tctatcctagaggaggtcaatgacctttgtgccaaaggctttaaagaggttaccctattg
ggacaaaatgtagacagctacctttggtacggtggaggcttgaaaaaagattttgaaaac
gcaagtgagatgcaaaaggcaacggccgttaatttctccaatcttttggatatggtagcc
aatgcccagcccaaactgagaatccgtttttctacttccaaccctcaggatatgaccttg
gatgtgatccatgtgatggcaaagcacaggaatatctgcaactatatccatttaccggta
cagagcggaagcaataggatccttaaggcgatgaaccgtttacataccagggaggaatat
tttgagcttatagataatataagacaaataatccctgaatgttctatctcacaagatatg
atagcaggattcccttcagaaaccgaagaagaccaccaagacaccctttctctattggaa
aaggtgaaatacgactttggatatatgtacgcctattcggaaagacctggtactttggca
gaacgcaaaatggaagatgatgtacctgagcctgttaaaaaaagaaggttggccgaaata
atcgctttacaaagggagcatggccactttagaacaaaacagcatttaggcaaagtagaa
gaggtcctgattgaaggggaatcaaaaaaatctgattcgcaatggatgggcaggaattca
caaagcacagtggtggtttttcccaaggaaaattacaaagttggtgattttgtgaacgta
aaaataaacgattgcacttctgccacccttataggggaagcagtaggctacagtgataac
aattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (45)   

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