KEGG   Sediminicola sp. YIK13: SB49_12005
Entry
SB49_12005        CDS       T04145                                 
Name
(GenBank) spore coat protein
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
syi  Sediminicola sp. YIK13
Pathway
syi00521  Streptomycin biosynthesis
syi00523  Polyketide sugar unit biosynthesis
syi00525  Acarbose and validamycin biosynthesis
syi00541  O-Antigen nucleotide sugar biosynthesis
syi01100  Metabolic pathways
syi01110  Biosynthesis of secondary metabolites
syi01250  Biosynthesis of nucleotide sugars
Module
syi_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:syi00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    SB49_12005
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    SB49_12005
   01055 Biosynthesis of vancomycin group antibiotics
    SB49_12005
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    SB49_12005
   00525 Acarbose and validamycin biosynthesis
    SB49_12005
Enzymes [BR:syi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     SB49_12005
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD RmlD_sub_bind NAD_binding_4 NmrA KR
Other DBs
NCBI-ProteinID: ALM08456
UniProt: A0A0S1SDF7
Position
complement(2682750..2683757)
AA seq 335 aa
MNILVTGGAGFIGSNFINYLLKTDLHSNVINLDALTYAGNLHNTAQFKNNIRYTLVKGDI
CDTELVDQIFMEHSINAVVHFAAESHVDNSISGPLAFIKTNIEGTFVLLEAARKHWTNGP
FILKEGFEKARFHHISTDEVYGSLGPKGYFKESTPYAPNSPYSASKASSDFLVRSYHHTY
GLNVVTTNCSNNYGPHQHDEKLIPTIIRNAIKGRAIPIYGDGKNIRDWLFVTDHCKGIWE
VFKKGNSGETYLFGGGVERTNLQIANSLCSILDAIAPKKEGSYVDQIILVKDRPGHDYRY
AIDYSKVEKEIGWRPQENFETGLERTVDWYIKKYN
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgaatatattggtcacggggggagcgggttttattggtagcaattttattaactatctc
ttgaagaccgacctacattctaacgtaatcaatttggatgccttaacctatgctggaaac
ttgcataacacggctcaatttaaaaataacattcggtatacattagttaaaggtgatatt
tgtgatacagagctggtagaccaaatatttatggaacatagtattaatgcagtagtgcat
tttgcggctgaatcacatgtcgataattccatttcgggtcctttagcctttattaaaaca
aacatagaagggacatttgtacttttggaagccgcacgaaagcattggacaaatggacca
tttattttaaaagaaggatttgaaaaggcaagatttcatcatatatcaacagatgaggta
tatggtagtcttggaccaaagggatatttcaaagaaagtacgccttatgctccaaacagt
ccttacagtgcatcaaaggcgtcatctgattttttagttcgaagttatcaccacacctat
ggcttaaatgtggtcactaccaactgttctaataattatggtccccatcaacatgatgaa
aagttgattcccaccataataagaaatgctattaaaggaagagcaatccctatttatgga
gatgggaaaaatataagggattggttatttgtaactgaccattgtaaaggaatatgggag
gtttttaaaaaaggtaattcaggagaaacgtatctttttggaggaggagtagaaaggaca
aatttacagatagcgaatagtttgtgcagtattttagatgctatagcccctaaaaaggaa
ggaagttatgtggaccaaattatcctcgttaaggataggccaggccacgattatcgttac
gcaattgattattctaaggttgagaaggaaataggttggcgaccacaagagaattttgaa
acaggtttggaaaggacagttgattggtatataaaaaaatataactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (48)   

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