KEGG   Synechocystis sp. PCC 6803: sll1360
Entry
sll1360           CDS       T00004                                 

Gene name
dnaX
Definition
(GenBank) DNA polymerase III subunit
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
syn  Synechocystis sp. PCC 6803
Pathway
syn03030  DNA replication
syn03430  Mismatch repair
syn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:syn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    sll1360 (dnaX)
   03430 Mismatch repair
    sll1360 (dnaX)
   03440 Homologous recombination
    sll1360 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:syn03032]
    sll1360 (dnaX)
   03400 DNA repair and recombination proteins [BR:syn03400]
    sll1360 (dnaX)
Enzymes [BR:syn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     sll1360 (dnaX)
DNA replication proteins [BR:syn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     sll1360 (dnaX)
DNA repair and recombination proteins [BR:syn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     sll1360 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 Intein_splicing DNA_pol3_gamma3 AAA RuvB_N PT-HINT AAA_16 AAA_18 Herpes_Helicase AAA_11 AAA_22
Other DBs
NCBI-ProteinID: BAA17547
CyanoBase: sll1360
CYORF: sll1360
UniProt: P73507
Position
complement(1065660..1069010)
AA seq 1116 aa
MAYEPLHHKYRPQTFADLVGQTAIAATLSNAIEQERIVPAYLFTGPRGTGKTSSARILAK
SLNCIAGDRPTATPCGQCATCRAITNGSALDVIEIDAASNTGVDNIREIIERAQFAPVQC
RYKVYVIDECLTGDSQVLTRNGLMSIDNPQIKGREVLSYNETLQQWEYKKVLRWLDRGEK
QTLSIKTKNSTVRCTANHLIRTEQGWTRAENITPGMKILSPASVDVDNLSQSTALTASLG
GLSGAINYEAINTDKKNTTLSLSLKKQKPQDPFVNADVAKNLIFQHFCSAKEEKLKVSNP
IGEDIPTKKATDFGISEQKKLHQGQNRWEQKFSVLSTEPCLGMEVLTIPTHIADSPACDG
PTAPSSQNGWNIKRQDWDVCHPKYDSQPIKAMGKVPSAVKPVVPQTLLMFSAQSNLEVKE
NKFLRNGSRISLKKEWLGGTWTTVPSLFPNLGVHQFSYTQRAFSRKKINLLLNGLPIEDI
PPVQNPIAEALTAKPITTQKWEQWPPASGYRTWKSIPSPQWHTNFEEVESVTKGQVEKVY
DLEVEDNHNFVANGLLVHNCHMLSTAAFNALLKTLEEPPERVVFVLATTDPQRVLPTIIS
RCQRFDYRRIPLQAMVDHLRYIAGRENINIDQPALTLVAQIANGGLRDAESLLDQLSLLP
DLITPDKVWDLVGAVPEQDLLALLEAIASDDAETLLATCRQILNRGREPLVVLQNLASFY
LNLLIAQTAPQRSDLVAVTAETWQALCDTAPQWQRGVILQGQQKLKESEIQIRNTTQPRL
WLEVTLLGLLPSACGLDTGAVSQTAVRTPVAQPITPPKPSNVVTFPGGSHNHLTVVDSPT
MIPVSEPIVLEEKLEADVEPSSFEPSNAHWDLTQLWSETLNNLGALSQSLFKSFGSLINL
VGNNATVSVTTQQLLKIAAGKKDELEAALGQACGQSVKVNLVVGKPSTPETTPVNSAPPP
SHSKPPAFAPEPSPPPTAAVNANPAPTVPPSPPAIARGPATSEIKPSPRRESNNFSNPSR
PKPKPAPAMEEPPPTDIGDSATRKAIEQFAKNFDGEIVASDAAPKQESDNGDDLSTEPTA
ELGQQPMDHNGHLQINQPTVLNRPAIAPEEEEDLPF
NT seq 3351 nt   +upstreamnt  +downstreamnt
atggcctacgaacctctgcaccataaatatcgcccccagacctttgcagatttggtgggc
caaacggcgatcgccgccacattgagcaatgccattgaacaggagcgcatcgtacctgct
tacctatttacgggccccaggggaacgggaaaaacttcttcagcccgaattttagccaaa
tccttaaactgcatcgctggcgatcggcctactgccactccctgcggccaatgtgccacc
tgtcgggctattactaacggttcagctttagacgtaattgaaattgatgcggccagtaat
acaggggtagataatatccgagaaattattgaacgggctcaatttgccccagtacagtgc
agatataaagtatatgtgatcgatgaatgcttaacgggggactcacaagttttgacccgc
aatggcttaatgtccattgacaatccccaaataaaagggcgagaagttctgagctacaac
gaaactctacagcaatgggaatataaaaaagttttaagatggcttgacagaggcgaaaag
caaacattgtctattaagacaaaaaattctacagtacggtgtacggctaaccatttaatc
agaactgaacaaggatggacgagagcggaaaacatcactcccggaatgaagatactatcc
cctgcgagtgtggatgtggacaatttatcgcaaagtacggcactgaccgcaagcttaggc
ggtttgtccggggccatcaactacgaggcaatcaatacggacaaaaaaaatacgacctta
tctctatccttgaagaagcagaagccacaagacccttttgtcaatgcggatgtggcgaaa
aacttgatattccagcatttttgcagtgcaaaggaagagaaattaaaagtatccaatccc
attggcgaagacatccctacaaaaaaagccacggactttgggatctcagaacagaaaaaa
ttacatcagggtcagaaccgttgggagcagaaattctcggtcttatctacggaaccttgc
ttggggatggaagtattgactatcccaacccacatagccgattcccccgcttgcgatgga
cccacggcaccaagcagtcagaatggatggaatataaagcggcaagactgggatgtctgt
cacccaaaatacgattcacagccaataaaggctatggggaaagttccatctgctgtcaaa
cccgttgttccccaaaccttattgatgttttcagcacagtcaaacctggaggtaaaagaa
aacaagtttcttcggaatggctctcgcatatcactgaagaaggaatggcttggtggtaca
tggacgacggttccctctctatttccgaatctgggagtccatcaattcagttacacacag
agggctttttcccggaagaaaatcaacttattgctgaatggcttaccgatagaggatatc
ccaccagtgcaaaatcctatcgcagaagcattaacagcaaaacctattactacacaaaaa
tgggagcagtggccacccgcaagtggttatcggacttggaaatctattccatccccgcaa
tggcatacaaatttcgaggaagttgagtccgtcactaagggtcaagtggaaaaagtttat
gacctggaggtggaagataatcacaattttgttgccaatggcttactagtccataactgt
catatgttgagcacggccgcattcaatgccctgctaaaaaccttggaagagccaccggag
cgggttgtttttgtcctcgctaccaccgatccccagcgggttttacccaccattatttcc
cggtgtcagcggtttgattatcgccgcattcctttgcaggccatggtggaccatctccgt
tatattgctgggcgagaaaatattaatattgaccaaccagctttgaccctagtggcccaa
attgccaatggtggtttacgggatgcggaaagtttactcgatcaattaagtctgctcccc
gacctgattacccccgataaagtttgggacctcgtgggggcggtgccggaacaggatttg
ttagccctcctagaggcgatcgccagtgacgatgcagaaaccctattggctacctgtcgg
cagattttgaaccgggggcgggaacccttggtggtattgcaaaatttagccagtttttat
ttgaatttacttattgcccaaacagctccccaacgctcagatttggtggcggtgacggcg
gaaacctggcaagccctgtgtgacacggcgccccaatggcaaaggggagtgattttgcaa
ggacaacaaaaacttaaggaaagtgaaatccaaattcgtaacactacccagccccgactt
tggctagaggtgaccctgttggggctgttgccatccgcctgtgggttggacactggggca
gttagtcaaacggcagttagaacacctgtggctcaaccaataactccgccaaagcccagt
aatgtggtgactttccctggtggctcacacaaccatctaaccgtggtggattctcctaca
atgattcctgtttctgaacctattgttctagaagagaagctagaagcagatgtagagcca
tccagctttgagccgagcaacgcccattgggatctgacccagttatggtcggaaacgtta
aacaatctaggggcgctcagtcaatctttatttaaatcctttggttctttgatcaatttg
gtggggaataatgccaccgtcagtgttaccacccaacaactgcttaaaattgcggcgggc
aaaaaggatgaattggaagcggccctagggcaagcctgtggccaatcggtgaaagtgaat
ttggtggtgggtaagccatcgaccccggaaactactccggttaacagcgctcctccccct
agccatagtaagccgccagcctttgctccagagccaagccctccccccaccgcagcggtt
aatgctaatccggctcccactgtgcctccttctcccccggcgatcgccaggggccccgct
acatcggaaataaaaccttccccccgacgggaatcaaataatttctctaatccttctcgg
cccaaaccaaaaccggctccagccatggaagagccgcctccgacagatattggtgacagt
gccacccgcaaggcgatcgagcagtttgccaaaaattttgacggggaaattgtggcatcc
gatgcggctcccaaacaggaatcggataatggcgatgatttatctacggaaccaacggcg
gaacttggtcagcaacccatggatcacaatggacatctgcaaattaaccaacccaccgtc
ctgaaccgaccggcgatcgccccggaggaagaagaagatctacctttttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   CYORF (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (56)   

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