KEGG   Synechocystis sp. PCC 6803: slr0080
Entry
slr0080           CDS       T00004                                 

Gene name
rnhA
Definition
(GenBank) ribonuclease H
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
syn  Synechocystis sp. PCC 6803
Pathway
syn03030  DNA replication
Brite
KEGG Orthology (KO) [BR:syn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    slr0080 (rnhA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:syn03032]
    slr0080 (rnhA)
Enzymes [BR:syn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     slr0080 (rnhA)
DNA replication proteins [BR:syn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    slr0080 (rnhA)
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     slr0080 (rnhA)
   Elongation factors (archaeal)
     slr0080 (rnhA)
SSDB
Motif
Pfam: RNase_H RVT_3 NRDE-2 DDE_Tnp_1
Other DBs
NCBI-ProteinID: BAA10553
CyanoBase: slr0080
CYORF: slr0080
UniProt: Q55801
Position
2884357..2884839
AA seq 160 aa
MASTPNSVTLYTDGACSMNPGPGGYGAVILYGDGRREELSAGYKMTTNNRMEIMGAIAAL
SHLQEPSQVLLYTDSRYMVDAMSKGWAKKWKANGWQRNAKEKAKNPDLWETMLTLCEKHQ
VTFQWVKAHAGNKENERCDRLAVAAYQNNPNLVDEGFGKF
NT seq 483 nt   +upstreamnt  +downstreamnt
atggcctctacccccaattccgtaactctctacaccgatggtgcctgctccatgaatcct
ggccctggtggctatggcgcagtgattctctacggtgatggtcgtcgggaggaattgtcc
gccggttataaaatgaccaccaataatcgcatggaaattatgggggcgatcgccgccttg
agtcatttacaagaaccgtcccaagtgttgctctataccgattcccgctatatggtcgat
gccatgagcaagggttgggccaagaaatggaaagccaacggatggcaaaggaatgccaag
gaaaaggccaaaaaccccgacctgtgggaaacgatgttaacgctgtgcgaaaaacatcaa
gttacattccagtgggtcaaagcccacgctggcaataaggaaaatgagcggtgcgatcgc
ctagcggtggccgcctatcaaaataatcccaacttagtagatgaaggcttcggcaaattc
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   CYORF (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system