KEGG   Synechocystis sp. PCC 6803: slr1646Help
Entry
slr1646           CDS       T00004                                 

Gene name
rnc
Definition
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
syn  Synechocystis sp. PCC 6803
Brite
KEGG Orthology (KO) [BR:syn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:syn03019]
    slr1646 (rnc)
   03009 Ribosome biogenesis [BR:syn03009]
    slr1646 (rnc)
   03036 Chromosome and associated proteins [BR:syn03036]
    slr1646 (rnc)
Enzymes [BR:syn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     slr1646 (rnc)
Messenger RNA biogenesis [BR:syn03019]
 Prokaryotic Type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     slr1646 (rnc)
Ribosome biogenesis [BR:syn03009]
 Eukaryotic Type
  90S particles
   RNase
    slr1646 (rnc)
 Prokaryotic Type
  rRNA processing factors
   slr1646 (rnc)
Chromosome and associated proteins [BR:syn03036]
 Eukaryotic Type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     slr1646 (rnc)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Motif
Other DBs
NCBI-ProteinID: BAA18463
CyanoBase: slr1646
CYORF: slr1646
UniProt: P74368
Position
2071379..2072074
Genome map
AA seq 231 aa AA seqDB search
MNHPDFPPIGDPQLKLEALTHRSYCNEHPGTPSYDRLEFLGDAVLGFVVGRILFERYPHF
TEAELTRLRSQLVNQNQLAYLARFLHIAPEIRLSQSLARDDGQSSPSILADVFESLLGAA
LLDRGLTAVEDFIQELFVPILEQWEKSQDGRSPKLVPTMDVKSMLQQWALAKTKQLPEYE
LINTSGPPHAQEFTFTVKVAGKIHGQGSGPSKQIATKQAALEALKSLGLLQ
NT seq 696 nt NT seq  +upstreamnt  +downstreamnt
gtgaaccatcccgatttcccccccatcggggacccccagttaaaactcgaagccctcacc
catcgttcctattgcaacgaacatcctggtactccttcctatgaccggctggaatttctt
ggggatgcggtgttgggttttgtggtggggcgcattctttttgaacgttatccccatttt
actgaggcagagttaacccgtctgcggtcccagttggttaatcaaaatcagttggcctat
ctagcgaggtttttacacattgcgccggaaattcgcctgagccaaagtttggccagggac
gatggacaatccagcccttccatcctggccgatgtttttgaatcattgttgggggcggct
ctcctggataggggtttgacggcggtggaagatttcattcaagaactattcgttcccatc
ctagagcagtgggaaaaaagccaggatgggcgatcgccaaaactagtgccgaccatggat
gtaaaaagcatgctccagcagtgggccttggccaaaactaaacaattgccagaatatgaa
ctaatcaacaccagtgggccaccccatgcccaggaatttacctttaccgtcaaagtagcg
ggaaaaatccatggccaaggctctggccccagtaagcaaattgccaccaaacaggcagcc
ctagaggcattgaaaagtttggggctattgcaataa

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