KEGG   Synechococcus sp. PCC 6312: Syn6312_1992
Entry
Syn6312_1992      CDS       T02370                                 
Name
(GenBank) hypothetical protein
  KO
K03666  host factor-I protein
Organism
syne  Synechococcus sp. PCC 6312
Pathway
syne02024  Quorum sensing
syne03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:syne00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Syn6312_1992
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Syn6312_1992
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:syne03019]
    Syn6312_1992
   03036 Chromosome and associated proteins [BR:syne03036]
    Syn6312_1992
Messenger RNA biogenesis [BR:syne03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Syn6312_1992
Chromosome and associated proteins [BR:syne03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Syn6312_1992
SSDB
Motif
Pfam: Hfq
Other DBs
NCBI-ProteinID: AFY61125
UniProt: K9RT56
Position
1958485..1958703
AA seq 72 aa
MGDDFDANLPSVRQVQTLIKDNTEVEVKLVTSDLVVGKVRWQDNNCLCILDHYDQPTIVW
KQSIVFIKPKVS
NT seq 219 nt   +upstreamnt  +downstreamnt
atgggtgatgattttgatgctaatttacccagtgtccggcaagtccaaactttgattaaa
gataacaccgaagttgaggtcaaactggtaacgagcgatttggtggtgggcaaggttcgc
tggcaggataataattgcctctgcattctcgatcactacgatcagccaactattgtctgg
aagcagtccattgtctttatcaagccaaaagtttcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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