KEGG   Synechococcus sp. PCC 6312: Syn6312_3080
Entry
Syn6312_3080      CDS       T02370                                 
Name
(GenBank) bacterial nucleoid DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
syne  Synechococcus sp. PCC 6312
Brite
KEGG Orthology (KO) [BR:syne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:syne03032]
    Syn6312_3080
   03036 Chromosome and associated proteins [BR:syne03036]
    Syn6312_3080
   03400 DNA repair and recombination proteins [BR:syne03400]
    Syn6312_3080
DNA replication proteins [BR:syne03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Syn6312_3080
Chromosome and associated proteins [BR:syne03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    Syn6312_3080
DNA repair and recombination proteins [BR:syne03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      Syn6312_3080
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF2267 SIS_2 HU-CCDC81_bac_2 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: AFY62132
UniProt: K9RYJ2
Position
3008272..3008583
AA seq 103 aa
MNKAELVDAVADKANVTKKQAEVVISAAVDVIMDAVADGDKVTLVGFGAFEPRERKAREG
RNPKTGEKMEIPATKVPAFSAGKLFKEKVSPPAPPAPTPGKKK
NT seq 312 nt   +upstreamnt  +downstreamnt
atgaacaaggccgagttagttgatgcagttgcagataaggcaaatgtcacaaaaaaacag
gcggaagttgtcatctcggccgccgttgatgtgattatggatgccgtagccgatggcgat
aaagtaaccctggttggctttggggcctttgaaccccgggagcgcaaagcacgggaagga
cgcaatcccaaaacgggtgaaaaaatggaaattccggccactaaagttccagctttttcg
gctggcaaattgttcaaagaaaaagtctctccccctgcgcccccggccccaacccctggt
aaaaagaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system