KEGG   Picosynechococcus sp. PCC 7002: SYNPCC7002_A0618
Entry
SYNPCC7002_A0618  CDS       T00664                                 
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
syp  Picosynechococcus sp. PCC 7002
Pathway
syp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:syp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SYNPCC7002_A0618 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:syp03019]
    SYNPCC7002_A0618 (deaD)
   03009 Ribosome biogenesis [BR:syp03009]
    SYNPCC7002_A0618 (deaD)
Enzymes [BR:syp01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     SYNPCC7002_A0618 (deaD)
Messenger RNA biogenesis [BR:syp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SYNPCC7002_A0618 (deaD)
Ribosome biogenesis [BR:syp03009]
 Prokaryotic type
  rRNA helicases
   SYNPCC7002_A0618 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 HEM4 Phasin
Other DBs
NCBI-ProteinID: ACA98624
CyanoBase: SYNPCC7002_A0618
UniProt: Q9F0Z5
Position
complement(647534..648997)
AA seq 487 aa
MTTSFQTIGLSDARVDLLENIGFEKPTEIQSKAIPAILEGRDVVGLSQTGTGKTAAYSLP
FLEKIDLEQKTVQGLILTPTRELAVQVTQSLKEFAVDRRLWVLTVCGGQSMERQIRSLQK
GVHIVVGTPGRVIDLLERGKLSFEELRWAVLDEADEMLSMGFIDDVKKILRQSPKTRQTV
CFSATMPPAIRDLVENFLNDPINITIKQPQVTPDRIAQEVYMIPRGWSKTKALLPILEMA
NPESAIIFVRTKRTASELTNELVEAGQSADEYHGDLNQNQREKLVRRFKDGKIKMIVATD
IAARGLDVENLSHVINFDLPDNTESYIHRIGRTGRAGKTGTAIALVEPSDRRLLRQIERR
VKQSLKVSTIPSRTEVEAQRVTRLETQVREALAGERMASFLPIVKRLGDEYDPQAIAAAV
LQMMYDNNSPEWLNEDWEVPEVNTKTGLPKPTKKGGRSGRRSNYKGSGGGYKGDRSRGRR
SYSSNHS
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgaccacttcttttcaaaccatcggcttatccgacgctcgcgttgacctgttagaaaat
atcggcttcgaaaagcccaccgagattcaaagtaaagcgatccccgcaatcctcgaaggc
cgggacgtggtgggactatcccaaacaggtacaggtaaaaccgccgcctactccctgcct
ttccttgaaaaaattgacctggaacaaaagaccgtccagggtttgattctgacccccacc
cgtgaactggcggtgcaggtgacccagtccctcaaggaattcgccgtggatcgtcgtctc
tgggtgctcaccgtctgcggtggtcaatccatggaacggcaaattcgcagcctgcaaaag
ggcgtccacattgttgtgggtacgccgggccgggtcatcgatctcctcgaacggggtaag
ttgtcctttgaagaactccgttgggcagtgcttgacgaagccgatgaaatgctcagtatg
ggcttcattgatgatgtgaaaaagattttgcgtcagtcccccaaaactcgccaaacggtt
tgtttctcggcgaccatgccccccgcaatccgggatctggtggaaaatttcctcaatgac
ccgatcaacatcacgatcaaacagccccaggtcacgcctgaccgcattgcccaagaagtc
tatatgattccgcgcggttggtcaaaaaccaaagccctcctgcccatcttggaaatggca
aacccagagtcggcgattatcttcgtgcgcacgaaacgtacagcttcggagttgaccaat
gagttggttgaagcgggccaaagtgccgatgagtaccatggcgacctcaaccaaaaccaa
cgggaaaaactggtacgtcgctttaaggatggcaagatcaagatgattgtcgccacggat
attgcggcgcggggtctggacgtggaaaacctcagccacgtgattaactttgatttacca
gataatacggaaagttacattcaccgcatcggtcggacgggtcgggctggtaaaacggga
acggcgatcgccctcgtcgaacccagcgatcgccggttgttacgtcaaattgaacggcgc
gtcaaacagtccctcaaggtttcgactattccgagccgcactgaagtagaagcccaacga
gtgacccgcctggaaacccaagtacgggaagccttggccggggaacggatggcctccttc
ttgccgattgtgaagcgtttgggtgatgagtatgatccccaggcgatcgccgcggcggta
ttgcaaatgatgtacgacaataattcccccgaatggctcaacgaagattgggaagtaccg
gaagtcaacaccaagacaggtctccccaagccgacgaaaaaaggtggccgcagcggacgt
cgttctaactacaaagggagtggcggtggctacaaaggcgatcgctcccggggacgccgt
tcctacagttccaaccattcctaa

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