KEGG   Synechococcus sp. RCC307: SynRCC307_0124
Entry
SynRCC307_0124    CDS       T00523                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
syr  Synechococcus sp. RCC307
Pathway
syr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:syr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SynRCC307_0124 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syr03400]
    SynRCC307_0124 (ruvB)
Enzymes [BR:syr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SynRCC307_0124 (ruvB)
DNA repair and recombination proteins [BR:syr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SynRCC307_0124 (ruvB)
    RecFOR pathway proteins
     SynRCC307_0124 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_16 AAA_22 AAA_14 Mg_chelatase AAA_3 AAA_25 nSTAND3 Rad17 DprA_WH TsaE AAA_18 NB-ARC AAA_33 AAA_24 AAA_17 AAA_28 bpMoxR RNA_helicase IstB_IS21 NTPase_1
Other DBs
NCBI-ProteinID: CAK27027
CyanoBase: SynRCC307_0124
UniProt: A5GQ68
Position
119756..120790
AA seq 344 aa
MAIQSSSSGSKPPAPKRLVAPEATAAEGDGGRDEGLRPRRLADYIGQSELKQVLGIAVEA
TRLRNDALDHVLLYGPPGLGKTTMALVLAEELGVSCRIASAPALERPRDIVGLLMNLQPR
ELLFIDEIHRLNRVAEELLYPAMEDFRLDLTVGAGPAARTRSLELPPFTLVGATTKAGSL
SSPLRDRFGLIQRLEFYSCSDLEAIVSRSAQLLQLELAAEAAAEIARRCRGTPRIANRLL
RRVRDFASVRGIAAVGAPVVVEALAMHRVDGRGLDPSDRRLLSLLETSYGGGPAGLDTLA
AALGEDPDTLEAVVEPFLLQLGFLQRTPRGRVLTDAGRAHLEAA
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggcgattcagtcctccagcagcggcagcaagccaccagcgcccaagcgtctggtggcc
ccagaggccacggctgctgagggtgatggcggccgggatgagggtctgaggccccgccgc
ttggctgattacatcggtcagagcgagctcaagcaggtgctggggattgctgttgaggcc
acccgcctgcgcaacgacgcgctcgaccatgtgctgctttatggcccaccgggtctgggc
aaaaccaccatggcgttggtgctcgccgaagagctgggtgtgtcctgccgcatcgctagt
gcgccagcccttgagcgtccgcgcgacatcgttggcctgttgatgaatctgcagccacgc
gagctgctctttattgatgaaattcaccggctgaaccgggtggccgaggagctgctctat
ccagcgatggaggattttcgccttgatctcaccgtgggcgccggtccagcggcccgcacc
cgcagtttggagcttccgccgttcactttggtgggggcgaccaccaaagccgggtccttg
agctcaccattgcgggatcgttttggcttaattcagcggctggagttctacagctgcagt
gatctcgaggcgatcgtctctcgctcggcccaactgctgcagttggagttagcggctgag
gccgccgctgaaatcgcccggcgctgccggggcaccccgcggatcgccaatcgcctgctg
cggcgtgtgcgtgatttcgccagcgttcgcgggattgccgcggtgggagcaccagtggtg
gtggaagccttggcgatgcaccgggtggatggccgcggcctcgatccctccgaccgccgt
ttgctcagcctgctggagaccagctacggcggaggcccagcgggtctcgataccctggca
gcagcgttgggtgaagaccccgacacgctggaagctgtggtggaaccgtttctgttgcaa
cttggttttctgcagcgcacccctcgcgggcgtgtgttgactgacgccggcagggcccat
ttggaggccgcttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (26)   
   Pfam (26)   
All databases (38)   

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