KEGG T00523: SynRCC307

Synechococcus sp. RCC307: SynRCC307_1222

Entry

SynRCC307_1222    CDS       T00523

Name

(GenBank) Hypothetical RNA methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

syr Synechococcus sp. RCC307

Brite

KEGG Orthology (KO) [BR:syr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:syr03009]
    SynRCC307_1222
Enzymes [BR:syr01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     SynRCC307_1222
Ribosome biogenesis [BR:syr03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SynRCC307_1222

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 TRAM MTS CMAS N6_N4_Mtase Met_10 Methyltransf_32 Cons_hypoth95

Other DBs

NCBI-ProteinID:

CAK28125

CyanoBase:

SynRCC307_1222

UniProt:

A5GTB6

Position

1081030..1082397

AA seq 455 aa
MPVDASHPNQLTLEIKDLALDGTGLAQHDGKLVFVSGALPAETATVRITGQGRGKLHGEI
SELTCSSPDRRDPVCILAGKCGGCSLLHWQDQAQSEWKQQQLQNTLRRVGRLECLVEPIR
STQAVLGYRNRAIIPVQERDNSLKAGFFQRGSHQVVNMNHCPVLDPRLDALIEPLKADLQ
AAGWPIYNEDTQKGLLRQLVLRAGVSSGEVLLGVVVRDDQFQGAQELAEQWMQRWPELVG
VVLNVQPKPGNTLLGPKERLLAGRPWLMESFAGRRFQIGLGTFFQVHHQQAEALVDALRS
ELQLQSGEVLVDAYCGVGTLGLPLIQEGVRLIGIEQSRESIERAQCNALLNGLEDTDFHA
GSVERRLQEFLPFTDVLLLDPPRKGLDARVCEAIREQPPARMAYVSCNPATLARDLALLC
ADQRFELTKVVPFDFFPQTTHIEAMAILTSSAAQL

NT seq 1368 nt +upstreamnt +downstreamnt
atgcctgttgatgccagccatcccaaccagctgacgctggagatcaaagatctcgccctc
gacgggaccggccttgctcaacacgacggcaagttggtctttgtttcaggcgctctgccg
gcagaaaccgccacggttcgaatcacagggcaaggacggggcaagcttcacggggagatc
agcgagctcacgtgctcgagccctgatcggcgtgatcccgtctgcatccttgccggcaaa
tgtggtggctgcagcctgttgcattggcaagaccaggcccagagcgagtggaaacagcag
cagctgcaaaacaccctgcgtcgtgtgggacgtttggaatgtttggtggagcccatccgc
tcaacccaggcggtgttgggctatcgcaaccgcgccatcatcccggtgcaggagcgggat
aactccttaaaagctggtttttttcaacgcggcagtcaccaggtggtgaacatgaaccac
tgccccgttctcgaccccaggctggatgccttgatcgagccgctcaaagcagatcttcaa
gccgccggctggccgatctacaacgaggacacccaaaagggtttgttgcgtcagttggtg
ctgcgagccggagtctccagcggtgaagtgttgcttggggtggtcgttcgcgacgatcag
tttcaaggggcacaggagttggctgagcagtggatgcagcgctggcccgaactggtgggt
gttgtgctgaacgtgcaacccaaaccaggcaacaccctgctcggcccaaaagaaaggctt
ctggctggtcggccctggttgatggaaagctttgcaggacgccgcttccaaatcggttta
ggcactttttttcaagtgcaccaccagcaagcggaagcgctggtggatgcgttgcgtagc
gagcttcaactccaatccggggaggtgttggtcgatgcctattgcggtgtgggcaccctt
ggactcccgttaatccaagagggtgttcgtctgattggcattgagcaaagccgcgaaagc
attgagcgggctcaatgcaatgccctgctcaatggactggaagacacggacttccatgcc
ggttctgtcgagcgccggctgcaggaattcctgccttttaccgatgtgctgctcctcgat
ccaccgcgcaagggattggatgcccgggtgtgtgaggcgatcagggagcaaccaccagca
cgcatggcctatgtcagctgcaatccagccaccttggcccgcgacctagcgctcctctgc
gccgaccagcgttttgagctgacgaaggtggtgccgtttgatttcttcccgcaaaccacc
cacatcgaggcgatggcaatcctgactagcagcgcagctcagctttga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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