KEGG   Picosynechococcus sp. PCC 73109: AWQ23_08890
Entry
AWQ23_08890       CDS       T05693                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
syv  Picosynechococcus sp. PCC 73109
Pathway
syv03410  Base excision repair
syv03430  Mismatch repair
syv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:syv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AWQ23_08890
   03430 Mismatch repair
    AWQ23_08890
   03440 Homologous recombination
    AWQ23_08890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syv03400]
    AWQ23_08890
DNA repair and recombination proteins [BR:syv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     AWQ23_08890
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AWQ23_08890
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AWQ23_08890
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB
Other DBs
NCBI-ProteinID: AMA09425
Position
complement(1846959..1849250)
AA seq 763 aa
MKVNWQVLVTPEVPDSFIQRVEILTDGKGDRHLAQLLWQRGFNDENTLAGFLNPEAYAPT
SAFAFGQEMKRAIHRLIQAKERGEKVAIWGDFDADGVTATSVLWEGLGQFFPQETQLTYY
IPNRLTESHGLNNPGIDRLKTWGASLIITCDTGSTNLTEIAHAKSLDIDLIITDHHTLPE
TRPDVLSIINPRYFAENHPLFHLSGVAVAYKLVEALSETLPDPTRPPVTDLLDLVAIGLI
ADLVALKGDCRYLAQVGIQALQKQTNPKTVVHPGIKALLDNCHKTGDRPTDISFGIGPRI
NAVSRIYGDASFCVELLTSRERGRCGYLAQQTELANARRKEIQQKVVQQAKAQIETLDLS
TTSVLVLCDAQWQGGVLGLVASQIAQTFGRPTILLTYDPEQDLWKGSARSAHGIDLYDLV
QAQSHLLYRFGGHPFAAGLSVRPENLAMFKTAINQQARQQWGGHIEMHQGEITVDLVVAI
ADLGESLFQSLECLEPFGMGNPKPKLLIKDCGLTMTGFSKLRDKFNRKLNYFKTNFELWD
ETDQISGIWWGGHPDDLTQGAGLDVVVELDRKEAQTQDQYFVRLLAVAPTAKIAAESAPQ
TLLDFRHQSLPQEALDQYVLQRDCPVTWQELYGNYQQAIATGKTLALHYVSPTADTPEQC
FKTLIGIAKYVLAQDQTVSLADLKAKLHCGDRPLDFGLKALKNVGFVAEIKGEQVRFQQT
TVTPDPEAFAQFKQAILEEQFQRQYFARAPLAVIQATLEKILV
NT seq 2292 nt   +upstreamnt  +downstreamnt
attaaagtgaattggcaggttttagtaacaccagaggtgccggactcttttattcagcgg
gtcgaaatcctgaccgatggcaaaggcgatcgccatttagcccaactcctgtggcaaagg
ggctttaatgatgaaaataccttagctggctttctcaacccagaggcttacgcgccaact
tctgcctttgcctttggccaagaaatgaaacgggcgattcaccgcttgatacaagcgaaa
gaacggggtgaaaaggtggccatctggggagactttgatgccgatggcgtcaccgcgacg
agtgttttatgggaaggattaggacaattttttccccaagaaacccaattaacctattac
attcccaatcgtttaacggaatcccacggcttgaataatccaggcattgaccgcctaaaa
acttggggcgcaagtttaattatcacctgcgatactggtagcacaaacttgacagaaatt
gcccacgcaaaaagccttgatattgacctgattattaccgatcaccacactttgccagaa
acccgacccgacgttttatcgattattaatccccgttactttgctgaaaatcatccccta
tttcatctatctggggttgctgtggcctataaattagttgaggcgttatcagaaactcta
ccggatccgacaaggccgccggttactgatcttttagacctcgtggcgattggtttaatt
gcagatttagtggccctcaaaggagattgtcgctatctggcccaggtggggatccaagcc
ctacaaaaacaaacaaacccgaaaactgtcgtccatccaggcatcaaagcgctcctcgat
aattgccataaaaccggcgatcgcccaaccgatatttcctttggcatcgggccacgaatt
aatgccgtcagtcgcatctacggcgacgcaagcttttgtgtggaactgctcaccagtcgt
gaacggggccgctgtggttacctcgcccaacagacagaactcgccaatgcccgtcgtaaa
gagattcaacaaaaggtcgtccagcaggccaaggcccagatcgaaaccctagatttatcg
accacgagcgttttagtgctgtgtgatgcccagtggcaggggggcgtgctgggattggta
gccagccaaattgcccaaacctttggccgcccgaccattcttttaacctacgatccggag
caagacctctggaaaggatccgcccgttccgcccacggcatcgatttgtatgatttggta
caagcccaaagtcacctgttgtatcgctttggcgggcatccctttgcggcgggtttgagt
gtgcggcccgaaaatttggcgatgtttaaaacagccattaatcaacaggcccggcaacag
tggggcggccacattgaaatgcaccagggagaaatcaccgttgatcttgtggtggcgatc
gccgacctgggggaatcattatttcaatctttagaatgcctagaaccctttgggatgggg
aatccaaaaccaaaactattgatcaaagactgtggtctgacgatgactgggtttagcaaa
ttgcgggacaaattcaatcgcaaactgaattatttcaagacaaactttgagctttgggat
gaaacggatcaaattagtggcatttggtggggcggccatcccgacgatttaacccagggg
gccgggttggatgtggtggttgagctagaccgcaaagaggcccagacccaggatcaatat
tttgtgcgtctcttggctgtagccccgaccgcaaaaatcgccgcagaatcggccccacaa
acgctactcgattttcggcatcagtctctcccccaggaagctttggatcagtatgtgttg
caaagggattgccctgtcacttggcaggaactttatgggaattatcaacaggcgatcgcc
acggggaaaacccttgccctccactatgtttcaccgactgccgatactccggaacagtgt
tttaaaaccctaattggcattgcgaaatatgtactggcccaggatcaaacggtttccctg
gctgacctgaaagcaaaactccattgtggcgatcgccccttagatttcggtctgaaggct
ttaaagaatgtcggctttgtcgctgaaattaaaggcgaacaagtgcgttttcagcagacg
accgtcactcctgatccagaagcctttgcccaatttaaacaggcaatcctcgaagagcaa
tttcaaaggcagtattttgcccgggctcccctcgctgttatccaagccaccctcgaaaaa
attctggtctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system