KEGG   Parasynechococcus marenigrum: SYNW1641
Entry
SYNW1641          CDS       T00144                                 
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
syw  Parasynechococcus marenigrum
Pathway
syw00470  D-Amino acid metabolism
syw00550  Peptidoglycan biosynthesis
syw01100  Metabolic pathways
syw01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:syw00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SYNW1641 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SYNW1641 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    SYNW1641 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:syw01011]
    SYNW1641 (ddlB)
Enzymes [BR:syw01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     SYNW1641 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:syw01011]
 Precursor biosynthesis
  Amino acid ligase
   SYNW1641 (ddlB)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp ATP-grasp_4 DUF2625
Other DBs
NCBI-ProteinID: CAE08156
CyanoBase: SYNW1641
UniProt: Q7U5Q9
Position
1579259..1580320
AA seq 353 aa
MSSSPTTVGVVFGGCSGEHDVSIRSAQTVAKGLTLGANRERYRVVLVYIDRDGRWWGPDL
AGKVLSSGCPPADSDLPQPLPAPGFRGLPAGTDVVAVWYPVLHGPNGEDGTIQGLFELMQ
QPYVGAGVLGSAVSMDKQAMKAALAGAGLAQVPYVCAQADELSDAARQEALLKRIESGLC
YPCFIKPANLGSSVGISKARNREELIHGLRLAATLDPRLVVEQGVQARELECAVLGGTTL
RASVVGEVRFDADWYDYETKYTDGRSTTLIPAPLPDGIVEAIRSQSIQACAAVGVTGMAR
VDFFYDDSRDRVWLNEINTLPGFTSQSMYPMLWEASGVTLEQLVHELLESAGQ
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgtcatccagccccaccacggtcggtgttgtcttcggcggctgctccggtgagcacgat
gtgtcgatccggtccgcacaaacggttgccaaaggcttgacccttggcgccaaccgtgag
cgttatcgggtggtcctcgtttacatcgatcgcgacggacgttggtggggccccgatctc
gccgggaaggttctcagcagcggctgtcctccagccgactcggatctcccccaaccgcta
cctgcccccgggttccgcggcctgccggcaggcaccgatgttgttgcggtctggtacccg
gttctgcatggaccgaacggggaagacggcacgattcaggggctgttcgaactgatgcag
cagccctacgtcggtgccggggttcttggttcagcggtgagcatggacaaacaggccatg
aaagctgccctggcaggtgcgggtctcgctcaggtgccctacgtctgcgcacaggcagac
gagctcagcgatgctgcccgccaggaagcacttctgaaaagaatcgagtccggcctgtgc
tacccctgcttcatcaagcccgccaatctgggctcgtcggtgggcatcagcaaagcccgg
aaccgtgaggagctcatccatgggttgagattggccgcaacgcttgatccacgcctcgtg
gtggaacagggggtgcaagcccgagaactggaatgcgctgtcctcggtgggacaaccctg
cgagcctccgtggtgggggaagttcgtttcgatgcggattggtacgactacgagaccaaa
tacaccgatggccgcagcaccacgctgattccagcccctttgcctgacggcattgtcgag
gcgatccggagccagtccatccaggcctgcgctgccgtgggcgttacggggatggccagg
gtggacttcttctacgacgacagcagagacagggtttggctgaatgagatcaacaccctg
cccggtttcacctcccagagcatgtaccccatgctctgggaggcctctggcgtaacactc
gaacagctcgtgcacgaactgctcgaaagcgcaggacaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (130)   
   KEGG ORTHOLOGY (1)   
   RefGene (126)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (153)   

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