KEGG   Parasynechococcus marenigrum: SYNW2144
Entry
SYNW2144          CDS       T00144                                 
Symbol
rnhB
Name
(GenBank) ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
syw  Parasynechococcus marenigrum
Pathway
syw03030  DNA replication
Brite
KEGG Orthology (KO) [BR:syw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SYNW2144 (rnhB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:syw03032]
    SYNW2144 (rnhB)
Enzymes [BR:syw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     SYNW2144 (rnhB)
DNA replication proteins [BR:syw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     SYNW2144 (rnhB)
   Elongation factors (archaeal)
     SYNW2144 (rnhB)
SSDB
Motif
Pfam: RNase_HII
Other DBs
NCBI-ProteinID: CAE08659
CyanoBase: SYNW2144
UniProt: Q7U4C6
Position
complement(2033555..2034274)
AA seq 239 aa
MRCRHCLSPRRLSLLMGLKPPLKTRNPRNPAVAGVGLRPQPLLIDSIPCHRGVAGVDEVG
RGCLFGPVFAGAVVLEAANASRLQQEGLTDSKRLSARRRGDLVPLIEHEAEAWGLGQSST
REIDRLGIRPATELAMLRALQRLPNRPELVLVDGNLPLRPWTGEQRSIVAGDQHSLAIAA
ASVIAKQCRDALMQRLSQRFPGYGLERHAGYGTALHRAALLDLGPSALHRRSFLRRFLG
NT seq 720 nt   +upstreamnt  +downstreamnt
atgaggtgccgccattgcctgagcccacgccggctgtcgttgttgatgggtctgaagcca
ccgctgaagacacggaatccgaggaaccccgccgtcgccggcgtcggtcttcggcctcag
cctctcctgattgattccatcccctgccaccgcggtgtcgccggggtggatgaagtggga
cggggctgcctgtttggccccgtctttgctggggctgttgtgttggaggctgccaacgcc
agccgtcttcagcaggaggggctcacagacagcaaacggttgtccgcacgccggcgaggg
gacttggtaccgttgattgaacatgaggcagaagcctgggggctgggccagtcgtcaacc
cgagagatcgaccgccttgggatccgtcctgccaccgagttggccatgctgagggcgctg
cagcggctaccgaatcggccggagctggtgttggtggatggcaatctgcctctgcgccca
tggacaggtgaacagcgcagcatcgtggccggcgaccaacattcattggcgatcgctgct
gccagcgtgatcgccaaacagtgccgggatgcattaatgcagcgtctgtcgcagcggttc
ccgggctatggcctggaacgccacgccggttacggcacggccctgcaccgtgcagccctg
ctcgatctcggaccgtcagctctgcatcgccgcagttttctccgacgctttctggggtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (413)   
   KEGG ORTHOLOGY (1)   
   RefGene (409)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (422)   

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