KEGG   Synechococcus sp. WH 7803: SynWH7803_1819
Entry
SynWH7803_1819    CDS       T00524                                 
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
syx  Synechococcus sp. WH 7803
Pathway
syx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:syx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SynWH7803_1819 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syx03400]
    SynWH7803_1819 (xthA)
Enzymes [BR:syx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     SynWH7803_1819 (xthA)
DNA repair and recombination proteins [BR:syx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     SynWH7803_1819 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: CAK24245
CyanoBase: SynWH7803_1819
UniProt: A5GMT0
Position
1670131..1670961
AA seq 276 aa
MRIASWNVNSVRTRLEHVLGWLDRNTIDVLALQETKVDDPLFPLKPFQERGYHLSIHGQK
SYNGVALISRQPLEDVRLGFTGELPGDADAEALGTQKRVISALVDGIRVVNLYVPNGSSL
DSEKYSYKLNWMGCLERYLRAAETRDEPLCVVGDFNIGPEARDLHDPERLTGGIMASEAE
RKALVQVLGSNLGDAFRLFEPGSGHWSWWDYRSGAWNRDSGWRIDHIYISSDLQELARSC
SIDKEERGREQPSDHAPVVVDLAWDFDEDDEDPEID
NT seq 831 nt   +upstreamnt  +downstreamnt
gtgcggatcgccagctggaacgtcaattcggtgcggacccgtctggagcatgttctcggc
tggttggatcggaacaccatcgatgtgctcgcccttcaggaaaccaaggttgacgatcct
ctgtttccgctgaagcccttccaggagaggggatatcacctcagcatccacgggcagaag
tcctacaacggcgttgccttgatcagccgccagcccctcgaggatgtgcgcctgggcttt
acgggcgaattgcccggcgacgcggatgccgaagcactcggcacgcaaaagcgcgtgatc
agcgccctggtggacggcatccgcgtcgtgaatctctacgtgccgaatggttccagcctg
gattcggagaagtacagctacaaactgaactggatgggctgccttgagcgctatctgcgc
gctgcggaaaccagggatgaaccactctgtgtggtgggtgacttcaacatcggaccggag
gcaagagatctccacgaccccgaacgcctcaccggagggatcatggcctcggaggcggaa
cggaaggctttggttcaggtgctcggctccaatctgggcgatgccttccgcctcttcgaa
ccgggcagcggacattggagctggtgggactaccgcagcggagcctggaaccgcgacagc
ggctggcggatcgatcacatctacatcagcagcgatcttcaggagcttgcgcgcagctgc
agcatcgacaaagaggagcggggcagggagcaacccagcgaccatgcgccggtggtggtg
gatctggcttgggacttcgacgaggacgacgaggaccctgaaatcgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system