KEGG T02098: SYNGTS

Synechocystis sp. PCC 6803 GT-S: SYNGTS_2023

Entry

SYNGTS_2023       CDS       T02098

Symbol

xthA

Name

(GenBank) exodeoxyribonuclease III

K01142

exodeoxyribonuclease III [EC:3.1.11.2]

Organism

syy Synechocystis sp. PCC 6803 GT-S

Pathway

syy03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:syy00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SYNGTS_2023 (xthA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syy03400]
    SYNGTS_2023 (xthA)
Enzymes [BR:syy01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     SYNGTS_2023 (xthA)
DNA repair and recombination proteins [BR:syy03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     SYNGTS_2023 (xthA)

SSDB

Motif

Pfam:

Exo_endo_phos Exo_endo_phos_2

Other DBs

NCBI-ProteinID:

BAK50771

Position

complement(2231853..2232650)

AA seq 265 aa
MDIASWNVNSVRSRQQHILDWLGTNPVDVLCLQETKVVDEDFPRQPFEEAGYHCHISGQK
SYNGVAIFSREPLQDVKIGFAALVEPALTGDLDEQKRVISGVYDGVRIVNLYVPNGSALD
SEKYLYKLRWLNLLQTYLEQLRRSDTPEFLVCGDFNIAPEDRDIHDPVGRENHIMATAME
REALTEVLAIANLQDAFRKFTEETGHYSWWDYRTRGFSRNRGWRIDHHYLTPQLYDQAQK
CWIDREPRGWEKPSDHAPVVVTINN

NT seq 798 nt +upstreamnt +downstreamnt
atggacatcgccagttggaacgttaattccgtccgcagtcgtcagcaacatatcctcgat
tggttgggcacaaaccctgttgatgtactttgtttgcaagaaactaaggtggtggatgaa
gattttccccggcaaccgtttgaagaggcgggctaccattgccatatttctgggcaaaag
tcctataacggcgtggccattttcagtcgggaaccattgcaagacgtgaaaatcggtttt
gcggccctagtggagccagccttgacgggggatttggatgaacaaaaacgagtgatcagt
ggcgtttatgacggtgtgcggatcgttaatctctacgttcccaatggatctgccctcgac
agtgaaaagtatttgtataaattgcggtggttaaacttactgcagacctatctggagcaa
ctgcgccgtagtgacaccccagaatttttggtctgtggagatttcaacattgccccagaa
gaccgggatatccatgacccagtgggccgggagaatcatattatggccactgccatggaa
cgggaagctttaacggaagtgttggcgatcgccaatttgcaggatgctttccgtaaattt
accgaagaaacgggccattacagttggtgggattatcgcactaggggctttagtcgcaac
cgggggtggcgcattgaccaccattatctaactccccaactctacgaccaggcccaaaaa
tgttggatagatagggaacccaggggttgggaaaaacccagtgaccatgctccggtggtg
gtaactatcaacaattaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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