KEGG   Candidatus Nitrosocosmicus oleophilus: NMY3_03516
Entry
NMY3_03516        CDS       T04185                                 
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
taa  Candidatus Nitrosocosmicus oleophilus
Brite
KEGG Orthology (KO) [BR:taa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:taa03016]
    NMY3_03516
Enzymes [BR:taa01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     NMY3_03516
Transfer RNA biogenesis [BR:taa03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    NMY3_03516
 Prokaryotic type
    NMY3_03516
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: ALI37698
UniProt: A0A654M1S6
Position
3241470..3242765
AA seq 431 aa
MNDRLMKISSPDIDKLAGIEYYTTEFEGIGGTIKKNTEDFHVQEIINDIFLSQISPEQTA
SNIFPVYEIRKKGIDSSHAILTLRKKTGLDLKIVGIKDAKATTIQYASSSTRKVIKNIDL
GKIKLTLVGYSRKPIEKNNLVGNTFEIRIVEPKRDKLDNISQFLYDINNLGNYYGLQRFG
SERLVTHLVGKAILERKFDKATEILMTCTTKYDSKFSREIREKLRDIKSNPNLLHEIPPG
MDIEKNLAQAILRGKDPISALRTIPINIRRLFVQAFQAYLFNKTLSVAIRDDFSLNIPEE
NDLCFDVYDDSLIFGKIRKYEKEKPTDSRIHRLPIIRLPGYSFQPGKNRFDKILKEFMKS
ENMTAKDFFIKEMQELSESGGFRQACFVCKNFKHKKEENSLLVGFSVPKGSYATILLREL
IKPANPIESGF
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgaatgatcgtttaatgaagatatcatcaccagatattgataaactcgcgggaattgaa
tattacacaacagagtttgaaggaataggtggaactataaaaaaaaatactgaggacttt
catgtacaagagataataaatgacattttcttaagccagatctctcctgagcagactgca
agcaatattttcccagtttatgaaattagaaaaaagggaatagattcaagtcatgcgatt
ctgactttgaggaaaaaaacgggccttgatctcaaaatagtgggcataaaagatgcaaag
gcgactacaattcaatatgctagcagcagcacaagaaaggtcataaaaaatatcgatctt
ggaaaaataaaattgacactggttggctactcaagaaaaccaatagaaaagaacaatttg
gtaggaaatacgtttgaaataagaattgttgaaccaaaaagagacaaactagataacatt
tcacaatttttgtatgatattaataacttgggcaactattatggattacaaagatttgga
agtgaacggttggtgactcatctagttggaaaagccatccttgagagaaaatttgacaag
gcaaccgagatcttaatgacttgtaccacaaaatatgactcaaaatttagtcgtgaaatt
agggaaaaactgagagacatcaaaagtaatccaaatttgctacacgaaatccctcctgga
atggatatagagaagaatttggcccaagcaatattgaggggaaaagatcctatctcggcc
ttgagaactatccctattaatatcagaagactatttgtccaagcgtttcaggcatatctt
ttcaataagactttaagtgttgctattagggacgacttttcccttaacatacctgaagaa
aatgatctctgttttgacgtttatgatgatagcttgatctttggaaaaattcgcaaatat
gagaaggaaaaacctactgatagtagaatacatagattaccgattattagattaccagga
tattctttccaacctggtaaaaatagatttgacaagatactaaaggaattcatgaaaagt
gaaaacatgaccgccaaagatttttttatcaaggagatgcaggaattaagtgagtcgggc
ggtttcaggcaagcttgttttgtatgcaaaaacttcaaacataaaaaagaagagaactca
ctgttagttgggttctcagtaccaaaaggatcttacgcaactattttattaagagagcta
atcaaacccgctaatcctattgagtcaggtttttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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