KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_21397
Entry
TRIADDRAFT_21397  CDS       T01069                                 
Name
(RefSeq) hypothetical protein
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    TRIADDRAFT_21397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tad04121]
    TRIADDRAFT_21397
Enzymes [BR:tad01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     TRIADDRAFT_21397
Ubiquitin system [BR:tad04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    TRIADDRAFT_21397
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     TRIADDRAFT_21397
SSDB
Motif
Pfam: WD40 zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX ANAPC4_WD40 zf-RING_5 zf-C3HC4_4 zf-rbx1 WD40_like zf-RING_10 TRAF3_RING Sina_RING TPR_MalT
Other DBs
NCBI-GeneID: 6751106
NCBI-ProteinID: XP_002109891
JGI: 21397
UniProt: B3RNR1
AA seq 659 aa
MATSLGARNSNGNNGNGNSRRLNRKRPLTPIDDGISDTYNDRNNDYICPICFGVIEEAYM
TKCGHSFCYECIRRSLDENSKCPKCNFQITDKVDPIFPNITLNELIIKHKRRLDVANKCE
SSVSKAANIIRGNRLDVADILSSKSNDDMVLSDINYLLESLSEKKQQLELNSKSNRLQLL
KEFLLQSRKNKEEQLNDLKTKLDLLSNDLKVVEENLVQFPTASTSPAFNGNVGVAATSNN
LNSTVNAGANGFNGSKYVNPKYLVSHSISERRKRLSIHYEDLEDCYFSIKQSAGSKDDSL
ELFMEHLSKFTKFDRFRALATLNYGDLYNHSSIVSSIEFDRDCDYFAIAGVTKKIKIFEY
SSIIRDAVDIHYPVTEMTCSSKISCISWSAYHKEVLASSDYEGTVALWDAFNGVKTRCYQ
EHEKRCWCVDFNKVDPKLFASGSDDAKVKLWSTNLEHSIASLEAKANVCCVKFSPVSRYH
LAFGSADHCVHYYDLRNTSKSLADFKGHRKAVSYTNFVNENEIVSASTDSQLKLWDLNVP
YCTRTFRGHSNEKNFVGLATDGDYIACGSENNSLYLYYKGLSKQLLSFKFDVVRSIFDKD
SRDDDSNEFVSAVCWKRVTNVLVAANSQGTIKVIPDFYPVLMFHNHYNAYDNMNLIVSP
NT seq 1980 nt   +upstreamnt  +downstreamnt
atggcaacttcactgggtgcaagaaatagcaatggtaacaacggtaatgggaatagtcgc
cggttaaatcgtaaacgtcctttaactccaattgatgatggaatttcggatacgtataac
gatcggaataacgactatatctgtcctatatgttttggtgtcatcgaagaagcttacatg
acaaaatgtggccatagcttttgctacgagtgtattcgaagaagtttagatgaaaatagt
aaatgtccgaaatgcaactttcaaatcactgataaagtggatcctatttttccaaatata
acattaaatgaattgattattaaacataagagaaggttagatgttgccaacaagtgtgaa
tcgtcagtaagtaaagccgccaatattattcgtggtaatcgcttagatgttgcggacatc
ctctcaagtaaatccaacgatgatatggttttatctgatattaattacctactggaatca
ttatcggaaaagaaacaacaactggaattgaacagtaaaagcaatcgcctacaattgctg
aaggagtttctattacaatcgaggaaaaataaggaagagcaactaaatgatttaaaaaca
aagctggatttactatcgaatgatttaaaagtagtggaggagaatcttgtccaatttccg
accgcttcaacctctcctgctttcaatggtaacgttggagttgcagcgactagcaataat
ttaaattcaactgtaaatgcaggtgctaatggatttaatggcagcaaatatgttaatccc
aaatatttagtaagtcatagtatcagtgaaagaagaaaacgtttaagtattcattatgaa
gatttggaagattgttatttttccattaagcaatcagctggctctaaagatgatagtttg
gaattattcatggaacatttatccaaatttacaaagtttgatcgttttagagcattagct
acgttaaattatggcgatctatataatcattcaagcatagtatctagcattgaatttgat
agggattgtgattattttgctatagccggtgtaacgaaaaaaattaagatttttgaatat
agtagcattatcagagacgctgttgatattcactatcctgtcacagaaatgacgtgtagc
tcgaaaattagttgcattagttggagtgcatatcacaaggaagttctagccagcagcgat
tacgaaggtactgttgctttatgggatgcgtttaacggagttaaaactagatgctatcag
gagcatgaaaaaagatgttggtgtgttgattttaataaagttgatcctaagttgtttgct
tctggttctgatgacgctaaagtgaagttgtggtcgaccaatttagagcattcaatagca
tctcttgaagccaaggcgaatgtttgttgtgtcaagttcagtcctgttagccgttaccat
ttggcatttggttcagccgatcactgcgtccattattacgatctgcgaaatactagtaaa
tctcttgcggattttaaaggccatcgcaaggctgtgtcttataccaactttgttaacgaa
aatgaaattgtatcagcttctaccgatagccagctaaagctttgggatttgaatgtacca
tactgcactagaacatttaggggtcatagtaacgaaaagaattttgttggcctggccaca
gatggagactatatagcttgcggcagtgagaacaattccttgtacctatattataagggg
ctttcaaagcagttattatctttcaaatttgatgttgtacgcagtatttttgataaagat
tcgagagacgatgacagtaatgaatttgtcagtgctgtttgttggaaaagggttactaat
gtgctggtagcagcaaatagtcaaggaaccataaaggtaattccggatttctatcctgta
ttgatgtttcataatcattacaacgcctacgataatatgaatctcattgttagcccataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (56)   

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