KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_50379
Entry
TRIADDRAFT_50379  CDS       T01069                                 
Name
(RefSeq) hypothetical protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03022  Basal transcription factors
tad03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    TRIADDRAFT_50379
  09124 Replication and repair
   03420 Nucleotide excision repair
    TRIADDRAFT_50379
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tad03021]
    TRIADDRAFT_50379
   03400 DNA repair and recombination proteins [BR:tad03400]
    TRIADDRAFT_50379
Enzymes [BR:tad01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     TRIADDRAFT_50379
Transcription machinery [BR:tad03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     TRIADDRAFT_50379
DNA repair and recombination proteins [BR:tad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     TRIADDRAFT_50379
SSDB
Motif
Pfam: DEAD_2 Helicase_C_2 HBB ResIII
Other DBs
NCBI-GeneID: 6754469
NCBI-ProteinID: XP_002113256
JGI: 50379
UniProt: B3RYU5
AA seq 720 aa
MKLNIDGLLVYFPYDYIYPEQYSYMCELKRALDAKGHCALEMPSGTGKTISLLSLIIAYQ
KVYPLHITKLIYCSRTVPEIEKALEEMKILLEYYEKQTGEKQKFLGLGLSARKNLCIHPE
ISKERDGKVVDGRCLGLTASYVRRNHQQDRSVEVCSFFEKFDTFGRDSVLPPGVYNLDDL
KDFGAKQGWCPYFLARHSILHANVVVYSYYYLLDPKIADLVSKEMSKQSVVVFDEAHNID
NVCIESMTVKISRKTIDRCQTALDVMDKKVKKIKETDKKKLQEEYRRLVEGIYLIPDKTI
ALLIVQHVVQETPMSFLHHIKETVCIDRKPLRFCSERLQSLMHTLEIINNSEFAALAAAA
SFATLVSTYSKGFTLIIEPFDDRAPTIPDPVLHFSCMDASIAIKPVFDRFQSVVITSGTL
SPLDMYPKILNFRPVSMSSYTMTLARPSLCPLIVTRGNDQVTISSKFESREDIAVMRNYG
NLLAELTASVPDGVVCFFPSYTYMESVVSFWCDQGIMNNIIRNKLLFIETQDLAETVLAL
ENYYKACENGRGAVLLSVARGKVSEGIDFDHHYGRAVLMFGIPYVYTQSRKLRARLDYLR
ENYQIRENDFLTFDAMRHAAQASCVGRAIRGKSDYGIMVFADKRYSRLDKKGKLPKWIQE
YLKDSVCDLTTDEAVQISKKFLRQMAAPFNKEDQLGLSLLTLEQLESREGQEAAKLAQRS
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgaagttgaatattgatggcttattggtctattttccctatgattatatctatcctgaa
caatactcatatatgtgtgagctcaagcgagctcttgatgcaaagggccactgcgctttg
gagatgccttcagggactggtaaaactatatccctattatctttaattatagcatatcaa
aaggtttatccgttgcatatcaccaaattaatatattgttcacgtacagtaccagaaatt
gagaaggcgttggaagaaatgaaaattcttctcgaatactacgagaaacaaaccggagaa
aaacagaaatttcttggactaggtcttagtgctcgtaagaatctttgtatacacccagag
atcagcaaagaacgtgatggtaaggttgttgatggcagatgtcttggtttaactgcatct
tatgtacgtagaaaccatcaacaagatcgatcagtagaagtttgcagcttttttgagaaa
tttgatacatttggtcgagactctgttttacctcctggagtctataacctggatgactta
aaagactttggtgcaaaacaaggatggtgtccttattttcttgctcggcattcaatcttg
cacgcaaatgtggtggtgtatagctattattacttgctagatccgaaaattgccgattta
gtatctaaggaaatgtctaaacaatctgtagtggtcttcgatgaagctcacaacattgat
aacgtttgcattgaatctatgactgtaaagatatctagaaaaaccattgatagatgccaa
accgccttagacgttatggataagaaagttaaaaagattaaggaaaccgataaaaagaaa
cttcaagaagaataccgaagattagttgaaggtatttacttaataccggataaaaccatt
gctttgttaatagttcagcatgttgtgcaagagactccaatgtcgtttcttcatcacatt
aaggagacagtatgtattgataggaagcctttaagattttgttcagaaagattacaatca
cttatgcatactttggaaataataaacaatagcgaatttgctgctctagcagctgcagca
agctttgctacgcttgttagtacctattctaaaggattcactctcatcattgagccattt
gatgatcgtgcacccacaataccagatccagttctacattttagttgcatggatgcatct
atagctataaagccggtatttgatcgttttcaatccgtagttataacctcagggacttta
tcacctttagacatgtatccgaaaattctaaattttcgccctgtatctatgtcatcatat
acgatgacattggcgcgtccaagtttatgcccattaattgttactagaggaaatgatcaa
gttacaataagttccaaattcgaatcacgcgaagatattgctgtcatgagaaactatggt
aatctactagcagagctgaccgcttctgtaccagatggagttgtttgtttcttcccgagt
tatacctatatggaatcagtcgtaagcttttggtgtgaccagggtattatgaataatatt
attagaaacaagctcttatttattgagacacaagatctggctgagactgtcttggcttta
gaaaattattataaggcgtgtgaaaatggtcgaggtgcagtattattatctgtagcacgt
ggcaaagtttcggaaggaattgactttgatcatcattacggccgagccgtactcatgttt
ggtatcccatatgtgtatacacaaagtcgtaaattacgggccagattagattatcttcgg
gaaaattatcaaattcgagaaaatgatttcttgaccttcgatgcaatgagacacgcagca
caggcaagttgtgttggtcgagcaatccgaggaaaatcagattatggtataatggtattt
gcagataagcgctattcaagactagataaaaagggaaaacttccaaagtggattcaagaa
tatttaaaggattctgtttgtgatttaacaacagatgaagctgtacagatttctaaaaaa
tttttaagacaaatggctgctcctttcaataaggaagatcaacttgggctatcgctttta
acccttgaacagttagaatctagagaaggccaagaagctgcaaaacttgctcaaagaagc
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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